RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 CCDC86Q9H6F5 360 aaKnown RBP11.15□□□□□ -0.62
COL20A1-201ENST00000358894 EMC7Q9NPA0 242 aa11.15□□□□□ -0.62
COL20A1-201ENST00000358894 VSX1Q9NZR4 365 aaPredicted RBP11.15□□□□□ -0.62
COL20A1-201ENST00000358894 SHOXO15266 292 aa11.15□□□□□ -0.62
COL20A1-201ENST00000358894 IGHA1P01876 353 aa11.15□□□□□ -0.62
COL20A1-201ENST00000358894 SFTPBP07988 381 aa11.15□□□□□ -0.62
COL20A1-201ENST00000358894 ADRA2AP08913 450 aa11.15□□□□□ -0.62
COL20A1-201ENST00000358894 ACSM4P0C7M7 580 aa11.15□□□□□ -0.62
COL20A1-201ENST00000358894 POU3F3P20264 500 aaPredicted RBP11.15□□□□□ -0.62
COL20A1-201ENST00000358894 PPICP45877 212 aa11.15□□□□□ -0.62
COL20A1-201ENST00000358894 TAS2R20P59543 309 aa11.15□□□□□ -0.62
COL20A1-201ENST00000358894 CAMK2DQ13557 499 aa11.15□□□□□ -0.62
COL20A1-201ENST00000358894 AVPI1Q5T686 147 aa11.15□□□□□ -0.62
COL20A1-201ENST00000358894 PRAMEF20Q5VT98 475 aa11.15□□□□□ -0.62
COL20A1-201ENST00000358894 COX15Q7KZN9 410 aa11.15□□□□□ -0.62
COL20A1-201ENST00000358894 OR14A16Q8NHC5 309 aa11.15□□□□□ -0.62
COL20A1-201ENST00000358894 GABRG3Q99928 467 aa11.15□□□□□ -0.62
COL20A1-201ENST00000358894 PLXNA3P51805 1871 aa11.15□□□□□ -0.62
COL20A1-201ENST00000358894 TRPM7Q96QT4 1865 aa11.15□□□□□ -0.62
COL20A1-201ENST00000358894 FITM1A5D6W6 292 aa11.15□□□□□ -0.63
COL20A1-201ENST00000358894 A6NIZ1 184 aa11.15□□□□□ -0.63
COL20A1-201ENST00000358894 P2RY10O00398 339 aa11.15□□□□□ -0.63
COL20A1-201ENST00000358894 FADS1O60427 444 aa11.15□□□□□ -0.63
COL20A1-201ENST00000358894 HTR2CP28335 458 aa11.15□□□□□ -0.63
COL20A1-201ENST00000358894 RAP1BP61224 184 aa11.15□□□□□ -0.63
COL20A1-201ENST00000358894 RAP1AP62834 184 aa11.15□□□□□ -0.63
COL20A1-201ENST00000358894 ZNF85Q03923 595 aa11.15□□□□□ -0.63
COL20A1-201ENST00000358894 TMEM244Q5VVB8 128 aa11.15□□□□□ -0.63
COL20A1-201ENST00000358894 RNLSQ5VYX0 342 aa11.15□□□□□ -0.63
COL20A1-201ENST00000358894 STAC2Q6ZMT1 411 aa11.15□□□□□ -0.63
COL20A1-201ENST00000358894 SLC43A2Q8N370 569 aa11.15□□□□□ -0.63
COL20A1-201ENST00000358894 RBM24Q9BX46 236 aaKnown RBP11.15□□□□□ -0.63
COL20A1-201ENST00000358894 TGIF2Q9GZN2 237 aa11.15□□□□□ -0.63
COL20A1-201ENST00000358894 MS4A7Q9GZW8 240 aaPredicted RBP11.15□□□□□ -0.63
COL20A1-201ENST00000358894 RTTNQ86VV8 2226 aa11.15□□□□□ -0.63
COL20A1-201ENST00000358894 ZDBF2Q9HCK1 2354 aa11.15□□□□□ -0.63
COL20A1-201ENST00000358894 ADRB1P08588 477 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 SNRNP70P08621 437 aaKnown RBP11.14□□□□□ -0.63
COL20A1-201ENST00000358894 ZGLP1P0C6A0 271 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 SLC2A1P11166 492 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 AMY2BP19961 511 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 MNX1P50219 401 aaPredicted RBP11.14□□□□□ -0.63
COL20A1-201ENST00000358894 RAP2BP61225 183 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 ELAVL1Q15717 326 aaKnown RBP11.14□□□□□ -0.63
COL20A1-201ENST00000358894 OR51S1Q8NGJ8 323 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 ELP5Q8TE02 316 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 ASB17Q8WXJ9 295 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 ZNF775Q96BV0 537 aaPredicted RBP11.14□□□□□ -0.63
COL20A1-201ENST00000358894 HRASLSQ9HDD0 168 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 CYR61O00622 381 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 CD27P26842 260 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 RAD52P43351 418 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 ACY1Q03154 408 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 FAM53BQ14153 422 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 FZD2Q14332 565 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 SLC22A6Q4U2R8 563 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 C14orf28Q4W4Y0 310 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 OR10K2Q6IF99 312 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 ZNF529Q6P280 563 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 PAPD4Q6PIY7 484 aaKnown RBP11.14□□□□□ -0.63
COL20A1-201ENST00000358894 RADILQ96JH8 1075 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 URM1Q9BTM9 101 aaKnown RBP11.14□□□□□ -0.63
COL20A1-201ENST00000358894 AICDAQ9GZX7 198 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 STEAP1Q9UHE8 339 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 MMACHCQ9Y4U1 282 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 A8MVM7 634 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 LANCL1O43813 399 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 FABP1P07148 127 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 ERCC1P07992 297 aaPredicted RBP11.14□□□□□ -0.63
COL20A1-201ENST00000358894 ZNF28P17035 718 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 ALKBH2Q6NS38 261 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 DCXRQ7Z4W1 244 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 ANKRD9Q96BM1 317 aaPredicted RBP11.14□□□□□ -0.63
COL20A1-201ENST00000358894 MOGAT1Q96PD6 335 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 MICU1Q9BPX6 476 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 NKX6-2Q9C056 277 aaPredicted RBP11.14□□□□□ -0.63
COL20A1-201ENST00000358894 SRPK3Q9UPE1 567 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 DTX4Q9Y2E6 619 aa11.14□□□□□ -0.63
COL20A1-201ENST00000358894 PTPRZ1P23471 2315 aaPredicted RBP11.14□□□□□ -0.63
COL20A1-201ENST00000358894 BCAT2O15382 392 aaPredicted RBP11.13□□□□□ -0.63
COL20A1-201ENST00000358894 CRTAPO75718 401 aaPredicted RBP11.13□□□□□ -0.63
COL20A1-201ENST00000358894 RECKO95980 971 aa11.13□□□□□ -0.63
COL20A1-201ENST00000358894 HLA-AP01891 365 aaKnown RBP11.13□□□□□ -0.63
COL20A1-201ENST00000358894 BIDP55957 195 aa11.13□□□□□ -0.63
COL20A1-201ENST00000358894 TAS2R19P59542 299 aa11.13□□□□□ -0.63
COL20A1-201ENST00000358894 ABCA11PQ4W5N1 156 aa11.13□□□□□ -0.63
COL20A1-201ENST00000358894 CLLU1Q5K131 121 aa11.13□□□□□ -0.63
COL20A1-201ENST00000358894 FAM74A1Q5RGS3 127 aa11.13□□□□□ -0.63
COL20A1-201ENST00000358894 STEAP1BQ6NZ63 245 aa11.13□□□□□ -0.63
COL20A1-201ENST00000358894 LIX1LQ8IVB5 337 aa11.13□□□□□ -0.63
COL20A1-201ENST00000358894 ARIH2OSQ8N7S6 290 aa11.13□□□□□ -0.63
COL20A1-201ENST00000358894 OR2G2Q8NGZ5 317 aa11.13□□□□□ -0.63
COL20A1-201ENST00000358894 CNTNAP3BQ96NU0 1288 aa11.13□□□□□ -0.63
COL20A1-201ENST00000358894 PRSS27Q9BQR3 290 aa11.13□□□□□ -0.63
COL20A1-201ENST00000358894 MARVELD1Q9BSK0 173 aa11.13□□□□□ -0.63
COL20A1-201ENST00000358894 SUSD2Q9UGT4 822 aa11.13□□□□□ -0.63
COL20A1-201ENST00000358894 IGHV5-51A0A0C4DH38 117 aa11.13□□□□□ -0.63
COL20A1-201ENST00000358894 SULT2B1O00204 365 aa11.13□□□□□ -0.63
COL20A1-201ENST00000358894 EPPINO95925 133 aa11.13□□□□□ -0.63
COL20A1-201ENST00000358894 WNT1P04628 370 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms