RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 GLTPQ9NZD2 209 aa6.71□□□□□ -1.34
VPS13A-202ENST00000357409 TRGV5A0A0B4J1U4 118 aa6.71□□□□□ -1.34
VPS13A-202ENST00000357409 MBLAC1A4D2B0 266 aaPredicted RBP6.71□□□□□ -1.34
VPS13A-202ENST00000357409 EDIL3O43854 480 aa6.71□□□□□ -1.34
VPS13A-202ENST00000357409 AK1P00568 194 aa6.71□□□□□ -1.34
VPS13A-202ENST00000357409 GLB1P16278 677 aa6.71□□□□□ -1.34
VPS13A-202ENST00000357409 HIST1H1CP16403 213 aaKnown RBP6.71□□□□□ -1.34
VPS13A-202ENST00000357409 ALDH3B2P48448 385 aa6.71□□□□□ -1.34
VPS13A-202ENST00000357409 RHOBP62745 196 aa6.71□□□□□ -1.34
VPS13A-202ENST00000357409 GPR176Q14439 515 aa6.71□□□□□ -1.34
VPS13A-202ENST00000357409 TSPYL5Q86VY4 417 aaPredicted RBP6.71□□□□□ -1.34
VPS13A-202ENST00000357409 OR2AE1Q8NHA4 323 aa6.71□□□□□ -1.34
VPS13A-202ENST00000357409 KCNJ16Q9NPI9 418 aa6.71□□□□□ -1.34
VPS13A-202ENST00000357409 ACOXLQ9NUZ1 547 aa6.71□□□□□ -1.34
VPS13A-202ENST00000357409 PRR13Q9NZ81 148 aa6.71□□□□□ -1.34
VPS13A-202ENST00000357409 KIAA1456Q9P272 454 aa6.71□□□□□ -1.34
VPS13A-202ENST00000357409 NKX6-3A6NJ46 265 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 TMPRSS11DO60235 418 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 AKAIN1P0CW23 69 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 GABRG2P18507 467 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 NTF3P20783 257 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 APEX1P27695 318 aaKnown RBP6.7□□□□□ -1.34
VPS13A-202ENST00000357409 AKR1C3P42330 323 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 KCNJ8Q15842 424 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 ZNF705AQ6ZN79 300 aaPredicted RBP6.7□□□□□ -1.34
VPS13A-202ENST00000357409 FBXL14Q8N1E6 418 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 ARL6IP6Q8N6S5 226 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 SUMF2Q8NBJ7 301 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 OR56B4Q8NH76 319 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 CMTM2Q8TAZ6 248 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 PCGF1Q9BSM1 259 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 GPR87Q9BY21 358 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 RANGRFQ9HD47 186 aaPredicted RBP6.7□□□□□ -1.34
VPS13A-202ENST00000357409 SSU72Q9NP77 194 aaKnown RBP6.7□□□□□ -1.34
VPS13A-202ENST00000357409 ZNF230Q9UIE0 474 aaPredicted RBP6.7□□□□□ -1.34
VPS13A-202ENST00000357409 TNFRSF10AO00220 468 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 OR3A4PP47883 348 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 INSL4Q14641 139 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 ZNF683Q8IZ20 524 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 C11orf44Q8N8P7 122 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 CSF3RQ99062 836 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 LIN7BQ9HAP6 207 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 TMEM181Q9P2C4 612 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 CACNG2Q9Y698 323 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 ARL2-SNX15V9GYD0 113 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 METTL15A6NJ78 407 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 NME2P1O60361 137 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 RFPL3O75679 317 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 ETHE1O95571 254 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 CSF3P09919 207 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 NQO2P16083 231 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 PMPCAQ10713 525 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 C4orf17Q53FE4 359 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 NSUN5P2Q63ZY6 315 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 BCORP1Q8N888 145 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 OR1L3Q8NH93 324 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 TUBA8Q9NY65 449 aaPredicted RBP6.7□□□□□ -1.34
VPS13A-202ENST00000357409 TMEM9Q9P0T7 183 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 PHLPP1O60346 1717 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 FOXE1O00358 373 aaPredicted RBP6.7□□□□□ -1.34
VPS13A-202ENST00000357409 TMIGD3P0DMS9 266 aaPredicted RBP6.7□□□□□ -1.34
VPS13A-202ENST00000357409 FPR3P25089 353 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 TEAD1P28347 426 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 RPL13AP3Q6NVV1 102 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 SORT1Q99523 831 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 RIMS4Q9H426 269 aaPredicted RBP6.7□□□□□ -1.34
VPS13A-202ENST00000357409 CSNK1G1Q9HCP0 422 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 PRELID1Q9Y255 219 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 MEOX1P50221 254 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 CAMK2BQ13554 666 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 CPZQ66K79 652 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 ACSM5Q6NUN0 579 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 SLCO4C1Q6ZQN7 724 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 SEMA6DQ8NFY4 1073 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 ISG20L2Q9H9L3 353 aaKnown RBP6.7□□□□□ -1.34
VPS13A-202ENST00000357409 PREX1Q8TCU6 1659 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 TERTO14746 1132 aaKnown RBP6.7□□□□□ -1.34
VPS13A-202ENST00000357409 SCGB1D1O95968 90 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 CA6P23280 308 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 GUCA2AQ02747 115 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 SPCS2Q15005 226 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 LIPNQ5VXI9 398 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 OR51F2Q8NH61 342 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 ABHD6Q9BV23 337 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 MS4A8Q9BY19 250 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 FRMPD1Q5SYB0 1578 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 LRIT2A6NDA9 550 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 CYR61O00622 381 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 GOSR1O95249 250 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 FOXK2Q01167 660 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.7□□□□□ -1.34
VPS13A-202ENST00000357409 C1orf87Q8N0U7 546 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 NRG4Q8WWG1 115 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 SDF2Q99470 211 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 IGHV3OR15-7A0A075B7D8 119 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 A0A1W2PPC4 97 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 CDK1P06493 297 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 ATP4BP51164 291 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 OR1C1Q15619 314 aa6.7□□□□□ -1.34
VPS13A-202ENST00000357409 ZNF626Q68DY1 528 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms