RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 CSNK1G1Q9HCP0 422 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 H0YIV9 168 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 TXNL1O43396 289 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 ADPRHP54922 357 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 PPP1CAP62136 330 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 TFAP2EQ6VUC0 442 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 KMT5CQ86Y97 462 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 FAM71CQ8NEG0 241 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 LINC01599Q8WXQ3 324 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 SLC22A12Q96S37 553 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 ARRDC1-AS1Q9H2J1 176 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 LIN7CQ9NUP9 197 aaKnown RBP5.08□□□□□ -1.6
PTPRD-202ENST00000356435 ONECUT1Q9UBC0 465 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 CHRNA9Q9UGM1 479 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 RAB22AQ9UL26 194 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 RGPD2P0DJD1 1756 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 TRBV4-1A0A0J9YWV2 114 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 LOC100289279A0A1B0GTE1 492 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 H0Y8G0 127 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 XRCC2O43543 280 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 ABCD3P28288 659 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 TAGLNQ01995 201 aaKnown RBP5.08□□□□□ -1.6
PTPRD-202ENST00000356435 TPBGQ13641 420 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 DUSP6Q16828 381 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 XAF1Q6GPH4 301 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 SLC48A1Q6P1K1 146 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 BTNL3Q6UXE8 466 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 ENTHD1Q8IYW4 607 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 SVBPQ8N300 66 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 OR6M1Q8NGM8 313 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 MS4A8Q9BY19 250 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 ADAM19Q9H013 955 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 TNFRSF1AP19438 455 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 ACHEP22303 614 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 GIFP27352 417 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 CD1CP29017 333 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 RPL34P49207 117 aaKnown RBP5.08□□□□□ -1.6
PTPRD-202ENST00000356435 CDK5R2Q13319 367 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 PLXDC2Q6UX71 529 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 BAGE3Q86Y29 109 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 BAGE2Q86Y30 109 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 LYSMD2Q8IV50 215 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 PIANPQ8IYJ0 282 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 SPEM1Q8N4L4 309 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 LGALS14Q8TCE9 139 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 DYNC2LI1Q8TCX1 351 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 MRPS24Q96EL2 167 aaKnown RBP5.08□□□□□ -1.6
PTPRD-202ENST00000356435 OR2M2Q96R28 347 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 COMMD5Q9GZQ3 224 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 GABARAPL1Q9H0R8 117 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 EXOSC3Q9NQT5 275 aaKnown RBP5.08□□□□□ -1.6
PTPRD-202ENST00000356435 ADAMTS5Q9UNA0 930 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 KIF13AQ9H1H9 1805 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 ANKRD61A6NGH8 418 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 DSCR3O14972 297 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 MAKP20794 623 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 FOXA1P55317 472 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 RPS16P62249 146 aaKnown RBP5.08□□□□□ -1.6
PTPRD-202ENST00000356435 HSF1Q00613 529 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 ZNF468Q5VIY5 522 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-202ENST00000356435 TMEM211Q6ICI0 200 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 APOOLQ6UXV4 268 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 TMEM64Q6YI46 380 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 CPEB2Q7Z5Q1 589 aaKnown RBP5.08□□□□□ -1.6
PTPRD-202ENST00000356435 B3GNT8Q7Z7M8 397 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 ZNF573Q86YE8 665 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 TECTBQ96PL2 329 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 NPFFR2Q9Y5X5 522 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 TMEM72A0PK05 275 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 SIRPB1O00241 398 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 CNR1P21554 472 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 FPR3P25089 353 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 GABRA5P31644 462 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 CSRP3P50461 194 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 EBPQ15125 230 aaKnown RBP5.08□□□□□ -1.6
PTPRD-202ENST00000356435 DCXRQ7Z4W1 244 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 BHLHE23Q8NDY6 225 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 GPR78Q96P69 363 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 C20orf85Q9H1P6 137 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-202ENST00000356435 NUDT19A8MXV4 375 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 HS3ST1O14792 307 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 ST8SIA5O15466 376 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 NSA2O95478 260 aaKnown RBP5.08□□□□□ -1.6
PTPRD-202ENST00000356435 CYC1P08574 325 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 RPL27P61353 136 aaKnown RBP5.08□□□□□ -1.6
PTPRD-202ENST00000356435 CTF1Q16619 201 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 ZNF789Q5FWF6 425 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 HENMT1Q5T8I9 393 aaKnown RBP5.08□□□□□ -1.6
PTPRD-202ENST00000356435 RGS7BPQ6MZT1 257 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-202ENST00000356435 YRDCQ86U90 279 aaKnown RBP5.08□□□□□ -1.6
PTPRD-202ENST00000356435 LGI3Q8N145 548 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 SPPL3Q8TCT6 385 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 TMEM106AQ96A25 262 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 NMNAT3Q96T66 252 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 JAM3Q9BX67 310 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 HAPLN2Q9GZV7 340 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 ZNF331Q9NQX6 463 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-202ENST00000356435 TIMM9Q9Y5J7 89 aa5.08□□□□□ -1.6
PTPRD-202ENST00000356435 KIF13BQ9NQT8 1826 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms