RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 TMEM64Q6YI46 380 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 OR51H1Q8NH63 302 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 PFN4Q8NHR9 129 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 APH1BQ8WW43 257 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 SLC7A6Q92536 515 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 GMLQ99445 158 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 TMEM43Q9BTV4 400 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 USP3Q9Y6I4 520 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 TEKQ02763 1124 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 SYT6Q5T7P8 510 aaPredicted RBP13.67□□□□□ -0.22
LMX1B-201ENST00000355497 ZNF468Q5VIY5 522 aaPredicted RBP13.67□□□□□ -0.22
LMX1B-201ENST00000355497 OR5M8Q8NGP6 311 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 ZNF251Q9BRH9 671 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 NIT2Q9NQR4 276 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 CTXN2P0C2S0 81 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 SEMA3BQ13214 749 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 H1FNTQ75WM6 255 aaPredicted RBP13.67□□□□□ -0.22
LMX1B-201ENST00000355497 GPR78Q96P69 363 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 PARP12Q9H0J9 701 aaKnown RBP13.67□□□□□ -0.22
LMX1B-201ENST00000355497 CHST8Q9H2A9 424 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 EPHX3Q9H6B9 360 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 GAR1Q9NY12 217 aaKnown RBP13.67□□□□□ -0.22
LMX1B-201ENST00000355497 GMPR2Q9P2T1 348 aaKnown RBP13.67□□□□□ -0.22
LMX1B-201ENST00000355497 COA3Q9Y2R0 106 aaPredicted RBP13.67□□□□□ -0.22
LMX1B-201ENST00000355497 ZNF85Q03923 595 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 VAMP3Q15836 100 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 SSX7Q7RTT5 188 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 CLEC2DQ9UHP7 191 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 CPN1P15169 458 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 GJA4P35212 333 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 ADAM5Q6NVV9 412 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 LILRA2Q8N149 483 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 ISL2Q96A47 359 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 ARRDC3Q96B67 414 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 TVP23CQ96ET8 276 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 C20orf27Q9GZN8 174 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 BANF2Q9H503 90 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 PADI1Q9ULC6 663 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 H7BYZ3 331 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 ABCD4O14678 606 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 CNMDO75829 334 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 NDUFB7P17568 137 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 LIPAP38571 399 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 RPL27P61353 136 aaKnown RBP13.66□□□□□ -0.22
LMX1B-201ENST00000355497 MFSD12Q6NUT3 480 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 NANOGP1Q8N7R0 232 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 EGLN1Q9GZT9 426 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 MOB1AQ9H8S9 216 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 GPR173Q9NS66 373 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 UMAD1C9J7I0 102 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 TAS2R45P59539 299 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 GPR85P60893 370 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 TFAP2EQ6VUC0 442 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 DCBLD2Q96PD2 775 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 TAS2R4Q9NYW5 299 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 FAM96BQ9Y3D0 163 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 BOLA1Q9Y3E2 137 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 STRAPQ9Y3F4 350 aaKnown RBP13.66□□□□□ -0.22
LMX1B-201ENST00000355497 FAM208AQ9UK61 1670 aaKnown RBP13.66□□□□□ -0.22
LMX1B-201ENST00000355497 CTNSO60931 367 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 FBXO46Q6PJ61 603 aaPredicted RBP13.66□□□□□ -0.22
LMX1B-201ENST00000355497 MRPL43Q8N983 215 aaKnown RBP13.66□□□□□ -0.22
LMX1B-201ENST00000355497 SLC25A46Q96AG3 418 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 STACQ99469 402 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 TMPRSS5Q9H3S3 457 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 COL14A1Q05707 1796 aaKnown RBP13.66□□□□□ -0.22
LMX1B-201ENST00000355497 OR2F2O95006 317 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 DEFB103AP81534 67 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 OR2F1Q13607 317 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 OR8G1Q15617 311 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 RPL7L1Q6DKI1 246 aaKnown RBP13.66□□□□□ -0.22
LMX1B-201ENST00000355497 PTRH1Q86Y79 214 aaKnown RBP13.66□□□□□ -0.22
LMX1B-201ENST00000355497 ZNF687Q8N1G0 1237 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 OR4F5Q8NH21 305 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 PHOSPHO2Q8TCD6 241 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 OR4F4Q96R69 305 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 C1QTNF3Q9BXJ4 246 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 UBQLN3Q9H347 655 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 SCPEP1Q9HB40 452 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 DCAF16Q9NXF7 216 aa13.66□□□□□ -0.22
LMX1B-201ENST00000355497 SULT1C4O75897 302 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 F10P00742 488 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 HNF1AP20823 631 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 FAM78AQ5JUQ0 283 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 ADGRG3Q86Y34 549 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 CDH26Q8IXH8 852 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 SIGLECL1Q8N7X8 197 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 C2CD4CQ8TF44 421 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 HDAC8Q9BY41 377 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 DHCR7Q9UBM7 475 aaKnown RBP13.65□□□□□ -0.22
LMX1B-201ENST00000355497 PDGFBP01127 241 aaPredicted RBP13.65□□□□□ -0.22
LMX1B-201ENST00000355497 JUNBP17275 347 aaPredicted RBP13.65□□□□□ -0.22
LMX1B-201ENST00000355497 BCL6P41182 706 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 LBX1P52954 281 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 EXT1Q16394 746 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 ZNF750Q32MQ0 723 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 NECAP1Q8NC96 275 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 GNPNAT1Q96EK6 184 aaPredicted RBP13.65□□□□□ -0.22
LMX1B-201ENST00000355497 ZNF629Q9UEG4 869 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms