RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 SLC2A10O95528 541 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 NID1P14543 1247 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 LIPAP38571 399 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 RFC3P40938 356 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 ETV6P41212 452 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 SRPXP78539 464 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 ISL2Q96A47 359 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 A0A096LPE4 126 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 A0A1W2PPZ6 126 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 IMPA2O14732 288 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 TNFSF15O95150 251 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 TCRBP04435 133 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 SRFP11831 508 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 CASP3P42574 277 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 IHHQ14623 411 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 YOD1Q5VVQ6 348 aaPredicted RBP12.09□□□□□ -0.47
SCN8A-202ENST00000355133 OR13F1Q8NGS4 319 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 MKRN2Q9H000 416 aaKnown RBP12.09□□□□□ -0.47
SCN8A-202ENST00000355133 PDFQ9HBH1 243 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 MYH9P35579 1960 aaKnown RBP12.09□□□□□ -0.47
SCN8A-202ENST00000355133 H7C1Q1 480 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 SCAF4O95104 1147 aaKnown RBP12.09□□□□□ -0.47
SCN8A-202ENST00000355133 AADACP22760 399 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 SRP9P49458 86 aaKnown RBP12.09□□□□□ -0.47
SCN8A-202ENST00000355133 OPCMLQ14982 345 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 TESK1Q15569 626 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 ADGRF3Q8IZF5 1079 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 LINC01599Q8WXQ3 324 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 ZNF346Q9UL40 294 aaKnown RBP12.09□□□□□ -0.47
SCN8A-202ENST00000355133 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
SCN8A-202ENST00000355133 IGHV3-15A0A0B4J1V0 119 aa12.08□□□□□ -0.47
SCN8A-202ENST00000355133 TRDV1A0A1B0GX56 115 aa12.08□□□□□ -0.47
SCN8A-202ENST00000355133 FITM1A5D6W6 292 aa12.08□□□□□ -0.47
SCN8A-202ENST00000355133 SMLR1H3BR10 107 aa12.08□□□□□ -0.47
SCN8A-202ENST00000355133 TFAP2AP05549 437 aa12.08□□□□□ -0.47
SCN8A-202ENST00000355133 FOLR1P15328 257 aa12.08□□□□□ -0.47
SCN8A-202ENST00000355133 HNRNPFP52597 415 aaKnown RBP12.08□□□□□ -0.47
SCN8A-202ENST00000355133 TLE4Q04727 773 aa12.08□□□□□ -0.47
SCN8A-202ENST00000355133 FAPQ12884 760 aa12.08□□□□□ -0.47
SCN8A-202ENST00000355133 DOK3Q7L591 496 aa12.08□□□□□ -0.47
SCN8A-202ENST00000355133 MDGA2Q7Z553 956 aa12.08□□□□□ -0.47
SCN8A-202ENST00000355133 TMEM99Q8N816 258 aa12.08□□□□□ -0.47
SCN8A-202ENST00000355133 RBFOX1Q9NWB1 397 aaKnown RBP12.08□□□□□ -0.47
SCN8A-202ENST00000355133 ASB1Q9Y576 335 aa12.08□□□□□ -0.47
SCN8A-202ENST00000355133 AGAP14A8MT82 685 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 C2CD4DB7Z1M9 353 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 E9PI62 339 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 HEXAP06865 529 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 OR8U8P0C7N1 319 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 IL34Q6ZMJ4 242 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 OR51H1Q8NH63 302 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 C11orf54Q9H0W9 315 aaPredicted RBP12.08□□□□□ -0.48
SCN8A-202ENST00000355133 POFUT1Q9H488 388 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 SLC5A6Q9Y289 635 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 SOD1P00441 154 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 HIST1H1CP16403 213 aaKnown RBP12.08□□□□□ -0.48
SCN8A-202ENST00000355133 ZNF26P17031 533 aaPredicted RBP12.08□□□□□ -0.48
SCN8A-202ENST00000355133 CCR5P51681 352 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 SNRPGP62308 76 aaKnown RBP12.08□□□□□ -0.48
SCN8A-202ENST00000355133 GNB1P62873 340 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 GPR78Q96P69 363 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 SHARPINQ9H0F6 387 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 C20orf85Q9H1P6 137 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 M0R1B8 84 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 FABP7O15540 132 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 CCR2P41597 374 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 GFERP55789 205 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 OTUD1Q5VV17 481 aaPredicted RBP12.08□□□□□ -0.48
SCN8A-202ENST00000355133 RBMS3Q6XE24 437 aaKnown RBP12.08□□□□□ -0.48
SCN8A-202ENST00000355133 SLC43A2Q8N370 569 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 CELF2-AS1Q8N7Q2 184 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 OR10J5Q8NHC4 309 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 FGF14Q92915 247 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 CCDC74BQ96LY2 380 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 TMEM30AQ9NV96 361 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 ASH2LQ9UBL3 628 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 NDRG4Q9ULP0 352 aaKnown RBP12.08□□□□□ -0.48
SCN8A-202ENST00000355133 MYO18AQ92614 2054 aaKnown RBP12.08□□□□□ -0.48
SCN8A-202ENST00000355133 LOC107986453A0A1B0GWG9 222 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 PLRG1O43660 514 aaKnown RBP12.08□□□□□ -0.48
SCN8A-202ENST00000355133 B4GALT3O60512 393 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 SIX6O95475 246 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 ATP1B1P05026 303 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 KIR2DL3P43628 341 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 ETV1P50549 477 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 ARL16Q0P5N6 197 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 HTR4Q13639 388 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 MRPL58Q14197 206 aaKnown RBP12.08□□□□□ -0.48
SCN8A-202ENST00000355133 OR8G2PQ6IF36 304 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 DHRS4L2Q6PKH6 230 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 NLRP8Q86W28 1048 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 SPNS2Q8IVW8 549 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 HSD17B11Q8NBQ5 300 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 DEFB108BQ8NET1 73 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 TIMD4Q96H15 378 aa12.08□□□□□ -0.48
SCN8A-202ENST00000355133 GON4LQ3T8J9 2241 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 HMX2A2RU54 273 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 CRYZL1O95825 349 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 IL2RAP01589 272 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 TBXA2RP21731 343 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms