RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 PRR22Q8IZ63 422 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 CCDC107Q8WV48 283 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 METTL21AQ8WXB1 218 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 ST8SIA4Q92187 359 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 PPP1R14AQ96A00 147 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 PTDSS2Q9BVG9 487 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 MFFQ9GZY8 342 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 PNO1Q9NRX1 252 aaKnown RBP22.09■■□□□ 1.13
CPNE1-202ENST00000352393 UPB1Q9UBR1 384 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 PLCL2Q9UPR0 1127 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 DHDHQ9UQ10 334 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 PIAS3Q9Y6X2 628 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 THADAQ6YHU6 1953 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 CD37P11049 281 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 CD1CP29017 333 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 RORAP35398 523 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 INSM1Q01101 510 aaPredicted RBP22.09■■□□□ 1.13
CPNE1-202ENST00000352393 BIKQ13323 160 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 MELKQ14680 651 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 SGCBQ16585 318 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 NDUFAF7Q7L592 441 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 EIF4E3Q8N5X7 224 aaKnown RBP22.09■■□□□ 1.13
CPNE1-202ENST00000352393 STK35Q8TDR2 534 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 DNAJA3Q96EY1 480 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 LRRC61Q9BV99 259 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 POTEKPQ9BYX7 375 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 ALPK2Q86TB3 2170 aa22.08■■□□□ 1.13
CPNE1-202ENST00000352393 TMEM82A0PJX8 343 aa22.08■■□□□ 1.13
CPNE1-202ENST00000352393 C17orf51A8MQB3 221 aa22.08■■□□□ 1.13
CPNE1-202ENST00000352393 H0YIG0 161 aa22.08■■□□□ 1.13
CPNE1-202ENST00000352393 HCRTR2O43614 444 aa22.08■■□□□ 1.13
CPNE1-202ENST00000352393 GMFGO60234 142 aa22.08■■□□□ 1.13
CPNE1-202ENST00000352393 SPARCP09486 303 aa22.08■■□□□ 1.13
CPNE1-202ENST00000352393 OR4E1P0C645 316 aa22.08■■□□□ 1.13
CPNE1-202ENST00000352393 IGFBP3P17936 291 aaPredicted RBP22.08■■□□□ 1.13
CPNE1-202ENST00000352393 ATF4P18848 351 aaPredicted RBP22.08■■□□□ 1.13
CPNE1-202ENST00000352393 RPL27P61353 136 aaKnown RBP22.08■■□□□ 1.13
CPNE1-202ENST00000352393 BTN1A1Q13410 526 aa22.08■■□□□ 1.13
CPNE1-202ENST00000352393 ACKR1Q16570 336 aa22.08■■□□□ 1.13
CPNE1-202ENST00000352393 GLT8D1Q68CQ7 371 aa22.08■■□□□ 1.13
CPNE1-202ENST00000352393 MAMDC2Q7Z304 686 aaPredicted RBP22.08■■□□□ 1.13
CPNE1-202ENST00000352393 PDZD9Q8IXQ8 264 aa22.08■■□□□ 1.13
CPNE1-202ENST00000352393 ASB5Q8WWX0 329 aa22.08■■□□□ 1.13
CPNE1-202ENST00000352393 ADIPOR1Q96A54 375 aa22.08■■□□□ 1.13
CPNE1-202ENST00000352393 SLC41A2Q96JW4 573 aa22.08■■□□□ 1.13
CPNE1-202ENST00000352393 SCPEP1Q9HB40 452 aa22.08■■□□□ 1.13
CPNE1-202ENST00000352393 MYOZ1Q9NP98 299 aaPredicted RBP22.08■■□□□ 1.13
CPNE1-202ENST00000352393 PRMT8Q9NR22 394 aaPredicted RBP22.08■■□□□ 1.13
CPNE1-202ENST00000352393 VSX1Q9NZR4 365 aaPredicted RBP22.08■■□□□ 1.13
CPNE1-202ENST00000352393 MRTO4Q9UKD2 239 aaKnown RBP22.08■■□□□ 1.13
CPNE1-202ENST00000352393 GTF2A1LQ9UNN4 478 aa22.08■■□□□ 1.13
CPNE1-202ENST00000352393 PRELID1Q9Y255 219 aa22.08■■□□□ 1.13
CPNE1-202ENST00000352393 A0A1W2PPC1 479 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 TSPAN4O14817 238 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 DOK2O60496 412 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 RAB3DO95716 219 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 PLGP00747 810 aaPredicted RBP22.07■■□□□ 1.12
CPNE1-202ENST00000352393 KIAA0895LQ68EN5 471 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 POMZP3Q6PJE2 187 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 TFAP2EQ6VUC0 442 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 CATSPERDQ86XM0 798 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 GALNT16Q8N428 558 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 EDAQ92838 391 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 OR8D2Q9GZM6 311 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 TAS2R4Q9NYW5 299 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 LGALS8O00214 317 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 WISP1O95388 367 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 MT-ATP6P00846 226 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 IGKV3-11P04433 115 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 NAGAP17050 411 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 HTR2CP28335 458 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 CCR5P51681 352 aa22.07■■□□□ 1.12
CPNE1-202ENST00000352393 ZSCAN2Q7Z7L9 614 aaPredicted RBP22.07■■□□□ 1.12
CPNE1-202ENST00000352393 C12orf45Q8N5I9 185 aaPredicted RBP22.07■■□□□ 1.12
CPNE1-202ENST00000352393 SLC25A21Q9BQT8 299 aaPredicted RBP22.07■■□□□ 1.12
CPNE1-202ENST00000352393 TCRBV16S1A1N1A0A5B0 115 aa22.06■■□□□ 1.12
CPNE1-202ENST00000352393 RLN2P04090 185 aa22.06■■□□□ 1.12
CPNE1-202ENST00000352393 CENPAP49450 140 aa22.06■■□□□ 1.12
CPNE1-202ENST00000352393 TMEM151BQ8IW70 566 aa22.06■■□□□ 1.12
CPNE1-202ENST00000352393 MS4A7Q9GZW8 240 aaPredicted RBP22.06■■□□□ 1.12
CPNE1-202ENST00000352393 CKLFQ9UBR5 152 aa22.06■■□□□ 1.12
CPNE1-202ENST00000352393 SLC16A7O60669 478 aa22.06■■□□□ 1.12
CPNE1-202ENST00000352393 HPP00738 406 aa22.06■■□□□ 1.12
CPNE1-202ENST00000352393 ATXN8OSP0DMR3 200 aa22.06■■□□□ 1.12
CPNE1-202ENST00000352393 CTLA4P16410 223 aa22.06■■□□□ 1.12
CPNE1-202ENST00000352393 KCTD18Q6PI47 426 aaPredicted RBP22.06■■□□□ 1.12
CPNE1-202ENST00000352393 TMEM205Q6UW68 189 aa22.06■■□□□ 1.12
CPNE1-202ENST00000352393 TINAGL1Q9GZM7 467 aaPredicted RBP22.06■■□□□ 1.12
CPNE1-202ENST00000352393 GLS2Q9UI32 602 aa22.06■■□□□ 1.12
CPNE1-202ENST00000352393 FITM1A5D6W6 292 aa22.05■■□□□ 1.12
CPNE1-202ENST00000352393 TEX46H3BTG2 121 aa22.05■■□□□ 1.12
CPNE1-202ENST00000352393 OR6A2O95222 327 aa22.05■■□□□ 1.12
CPNE1-202ENST00000352393 SPDEFO95238 335 aa22.05■■□□□ 1.12
CPNE1-202ENST00000352393 DDAH2O95865 285 aa22.05■■□□□ 1.12
CPNE1-202ENST00000352393 CD2P06729 351 aa22.05■■□□□ 1.12
CPNE1-202ENST00000352393 ZNF735P0CB33 412 aa22.05■■□□□ 1.12
CPNE1-202ENST00000352393 CTRB1P17538 263 aa22.05■■□□□ 1.12
CPNE1-202ENST00000352393 RIDAP52758 137 aaKnown RBP22.05■■□□□ 1.12
CPNE1-202ENST00000352393 CTRB2Q6GPI1 263 aa22.05■■□□□ 1.12
CPNE1-202ENST00000352393 ADGRE4PQ86SQ3 457 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms