RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ASB5Q8WWX0 329 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 FAM3DQ96BQ1 224 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 CDV3Q9UKY7 258 aaKnown RBP19.87■□□□□ 0.77
UPF3A-201ENST00000351487 DHDHQ9UQ10 334 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 CABIN1Q9Y6J0 2220 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 NPIPB13A6NJU9 1138 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 SNRPGP15A8MWD9 76 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 NPIPB4C9JG80 1138 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 TOX3O15405 576 aaPredicted RBP19.87■□□□□ 0.77
UPF3A-201ENST00000351487 PTGS2P35354 604 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 MFSD13AQ14CX5 517 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 C1QTNF12Q5T7M4 302 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 ZNF626Q68DY1 528 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 TMEM225Q6GV28 225 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 SPEM1Q8N4L4 309 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 ZNF248Q8NDW4 579 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 NFAM1Q8NET5 270 aaPredicted RBP19.87■□□□□ 0.77
UPF3A-201ENST00000351487 ASB10Q8WXI3 467 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 SEC22CQ9BRL7 303 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 CSF1P09603 554 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 CD37P11049 281 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 HLA-DOBP13765 273 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 FOXL2P58012 376 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 C17orf67Q0P5P2 114 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 SMAD2Q15796 467 aaKnown RBP19.86■□□□□ 0.77
UPF3A-201ENST00000351487 PCGF3Q3KNV8 242 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 RABEPKQ7Z6M1 372 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 BIVMQ86UB2 503 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 SLC26A10Q8NG04 563 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 MFSD8Q8NHS3 518 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 NUBPLQ8TB37 319 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 GPN1Q9HCN4 374 aaPredicted RBP19.86■□□□□ 0.77
UPF3A-201ENST00000351487 COA3Q9Y2R0 106 aaPredicted RBP19.86■□□□□ 0.77
UPF3A-201ENST00000351487 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 MS4A18H0YCH9 400 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 SOX1O00570 391 aaPredicted RBP19.86■□□□□ 0.77
UPF3A-201ENST00000351487 SLC22A5O76082 557 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 CD2P06729 351 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 IGFBP3P17936 291 aaPredicted RBP19.86■□□□□ 0.77
UPF3A-201ENST00000351487 IL11P20809 199 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 RBMS2Q15434 407 aaKnown RBP19.86■□□□□ 0.77
UPF3A-201ENST00000351487 PCK2Q16822 640 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 KIF26BQ2KJY2 2108 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 MS4A18Q3C1V0 323 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 C2orf76Q3KRA6 126 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 C16orf47Q6ZP98 133 aaPredicted RBP19.86■□□□□ 0.77
UPF3A-201ENST00000351487 ANKRD37Q7Z713 158 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 PPP1R14AQ96A00 147 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 GTF2A1LQ9UNN4 478 aa19.86■□□□□ 0.77
UPF3A-201ENST00000351487 PPIEQ9UNP9 301 aaKnown RBP19.86■□□□□ 0.77
UPF3A-201ENST00000351487 CREBL2O60519 120 aaPredicted RBP19.85■□□□□ 0.77
UPF3A-201ENST00000351487 ZNF354AO60765 605 aaPredicted RBP19.85■□□□□ 0.77
UPF3A-201ENST00000351487 NOS1APO75052 506 aaPredicted RBP19.85■□□□□ 0.77
UPF3A-201ENST00000351487 FBXW4P57775 412 aa19.85■□□□□ 0.77
UPF3A-201ENST00000351487 DNM1P34Q6PK57 102 aa19.85■□□□□ 0.77
UPF3A-201ENST00000351487 NPAS1Q99742 590 aa19.85■□□□□ 0.77
UPF3A-201ENST00000351487 SUSD2Q9UGT4 822 aa19.85■□□□□ 0.77
UPF3A-201ENST00000351487 R4GMQ9 66 aa19.85■□□□□ 0.77
UPF3A-201ENST00000351487 PRUNE2Q8WUY3 3088 aa19.85■□□□□ 0.77
UPF3A-201ENST00000351487 ANXA7P20073 488 aaKnown RBP19.84■□□□□ 0.77
UPF3A-201ENST00000351487 APOBEC1P41238 236 aaKnown RBP19.84■□□□□ 0.77
UPF3A-201ENST00000351487 OR3A3P47888 321 aa19.84■□□□□ 0.77
UPF3A-201ENST00000351487 DAP3P51398 398 aaKnown RBP19.84■□□□□ 0.77
UPF3A-201ENST00000351487 ZNF81P51508 661 aa19.84■□□□□ 0.77
UPF3A-201ENST00000351487 SSBP1Q04837 148 aaKnown RBP19.84■□□□□ 0.77
UPF3A-201ENST00000351487 OR5M10Q6IEU7 315 aa19.84■□□□□ 0.77
UPF3A-201ENST00000351487 MDGA2Q7Z553 956 aa19.84■□□□□ 0.77
UPF3A-201ENST00000351487 OR4C16Q8NGL9 310 aa19.84■□□□□ 0.77
UPF3A-201ENST00000351487 OR1J4Q8NGS1 313 aa19.84■□□□□ 0.77
UPF3A-201ENST00000351487 RNF138Q8WVD3 245 aa19.84■□□□□ 0.77
UPF3A-201ENST00000351487 SLC25A28Q96A46 364 aa19.84■□□□□ 0.77
UPF3A-201ENST00000351487 MGAT4CQ9UBM8 478 aa19.84■□□□□ 0.77
UPF3A-201ENST00000351487 CKLFQ9UBR5 152 aa19.84■□□□□ 0.77
UPF3A-201ENST00000351487 RAD1O60671 282 aa19.84■□□□□ 0.77
UPF3A-201ENST00000351487 KDM4BO94953 1096 aa19.84■□□□□ 0.77
UPF3A-201ENST00000351487 GIPP09681 153 aaPredicted RBP19.84■□□□□ 0.77
UPF3A-201ENST00000351487 GLT8D1Q68CQ7 371 aa19.84■□□□□ 0.77
UPF3A-201ENST00000351487 ARL5BQ96KC2 179 aa19.84■□□□□ 0.77
UPF3A-201ENST00000351487 CITED4Q96RK1 184 aa19.84■□□□□ 0.77
UPF3A-201ENST00000351487 KCNK17Q96T54 332 aa19.84■□□□□ 0.77
UPF3A-201ENST00000351487 SLC7A5P2Q9GIP4 190 aa19.84■□□□□ 0.77
UPF3A-201ENST00000351487 PRMT8Q9NR22 394 aaPredicted RBP19.84■□□□□ 0.77
UPF3A-201ENST00000351487 PIPOXQ9P0Z9 390 aa19.84■□□□□ 0.77
UPF3A-201ENST00000351487 EIF3KQ9UBQ5 218 aaKnown RBP19.84■□□□□ 0.77
UPF3A-201ENST00000351487 TMEM272A0A1B0GTI8 110 aa19.83■□□□□ 0.77
UPF3A-201ENST00000351487 ZNF208O43345 1280 aa19.83■□□□□ 0.77
UPF3A-201ENST00000351487 MPZL1O95297 269 aa19.83■□□□□ 0.77
UPF3A-201ENST00000351487 FBXO45P0C2W1 286 aa19.83■□□□□ 0.77
UPF3A-201ENST00000351487 DHODHQ02127 395 aa19.83■□□□□ 0.77
UPF3A-201ENST00000351487 SHBQ15464 509 aa19.83■□□□□ 0.77
UPF3A-201ENST00000351487 WDR45BQ5MNZ6 344 aa19.83■□□□□ 0.77
UPF3A-201ENST00000351487 TMEM71Q6P5X7 295 aa19.83■□□□□ 0.77
UPF3A-201ENST00000351487 H1FNTQ75WM6 255 aaPredicted RBP19.83■□□□□ 0.77
UPF3A-201ENST00000351487 KDM8Q8N371 416 aa19.83■□□□□ 0.77
UPF3A-201ENST00000351487 MEIOBQ8N635 442 aa19.83■□□□□ 0.77
UPF3A-201ENST00000351487 ST7LQ8TDW4 575 aa19.83■□□□□ 0.77
UPF3A-201ENST00000351487 DUSP15Q9H1R2 295 aaPredicted RBP19.83■□□□□ 0.77
UPF3A-201ENST00000351487 ZNF69Q9UC07 566 aa19.83■□□□□ 0.77
UPF3A-201ENST00000351487 A0A1W2PPC1 479 aa19.83■□□□□ 0.76
UPF3A-201ENST00000351487 NPIPA5E9PKD4 350 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms