RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 GABARAPO95166 117 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 AHSA1O95433 338 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 PPP1R3DO95685 299 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 IGHMP01871 453 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 LCKP06239 509 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 ADRA2AP08913 450 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 HIST1H1CP16403 213 aaKnown RBP8.56□□□□□ -1.04
MRPL55-204ENST00000348259 MYL12AP19105 171 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 SDHAP31040 664 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 IDUAP35475 653 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 RPL4P36578 427 aaKnown RBP8.56□□□□□ -1.04
MRPL55-204ENST00000348259 AQP2P41181 271 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 RPS5P46782 204 aaKnown RBP8.56□□□□□ -1.04
MRPL55-204ENST00000348259 CAPZA2P47755 286 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 SLC25A1P53007 311 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 SUCLG1P53597 346 aaKnown RBP8.56□□□□□ -1.04
MRPL55-204ENST00000348259 ATP5J2P56134 94 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 DSCR4P56555 118 aaPredicted RBP8.56□□□□□ -1.04
MRPL55-204ENST00000348259 RPL18Q07020 188 aaKnown RBP8.56□□□□□ -1.04
MRPL55-204ENST00000348259 ETFDHQ16134 617 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 TIGD6Q17RP2 521 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 CLEC12BQ2HXU8 276 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 ALG10Q5BKT4 473 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 SLC35D3Q5M8T2 416 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 SLC35F1Q5T1Q4 408 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 OR5M10Q6IEU7 315 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 PLBD1Q6P4A8 553 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 SEZ6L2Q6UXD5 910 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 STAC2Q6ZMT1 411 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 SLC16A12Q6ZSM3 486 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 NANOGNBQ7Z5D8 188 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 GTPBP8Q8N3Z3 284 aaPredicted RBP8.56□□□□□ -1.04
MRPL55-204ENST00000348259 C10orf53Q8N6V4 93 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 NPEPL1Q8NDH3 523 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 ADPRHL1Q8NDY3 354 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 OR5J2Q8NH18 312 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 POC1BQ8TC44 478 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 C12orf43Q96C57 262 aaKnown RBP8.56□□□□□ -1.04
MRPL55-204ENST00000348259 SFXN2Q96NB2 322 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 REG4Q9BYZ8 158 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 CXorf56Q9H5V9 222 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 CHCHD3Q9NX63 227 aaKnown RBP8.56□□□□□ -1.04
MRPL55-204ENST00000348259 TAS2R5Q9NYW4 299 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 ENPP5Q9UJA9 477 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 ZNF175Q9Y473 711 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 IER3IP1Q9Y5U9 82 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 MALRD1Q5VYJ5 2156 aa8.56□□□□□ -1.04
MRPL55-204ENST00000348259 ALPK2Q86TB3 2170 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 ZC3H12DA2A288 527 aaKnown RBP8.55□□□□□ -1.04
MRPL55-204ENST00000348259 CCDC182A6NF36 153 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 PLPP3O14495 311 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 PHF1O43189 567 aaPredicted RBP8.55□□□□□ -1.04
MRPL55-204ENST00000348259 PTHP01270 115 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 SCG5P05408 212 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 PPP3CBP16298 524 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 ZNF17P17021 662 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 IL11P20809 199 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 PSMB9P28065 219 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 TGFBR2P37173 567 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 RGS6P49758 472 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.55□□□□□ -1.04
MRPL55-204ENST00000348259 LGALS3BPQ08380 585 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 ACSM1Q08AH1 577 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 FOXF1Q12946 379 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 C1DQ13901 141 aaKnown RBP8.55□□□□□ -1.04
MRPL55-204ENST00000348259 CRMP1Q14194 572 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 GGTLC2Q14390 218 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 SPHARQ15513 63 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 ZNF239Q16600 458 aaKnown RBP8.55□□□□□ -1.04
MRPL55-204ENST00000348259 CTF1Q16619 201 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 KRTAP24-1Q3LI83 254 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 C3orf33Q6P1S2 294 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 P2RY8Q86VZ1 359 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 CNEP1R1Q8N9A8 125 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 ZNF485Q8NCK3 441 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 BBS1Q8NFJ9 593 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 OR4K17Q8NGC6 315 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 OR52E2Q8NGJ4 325 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 OR52N1Q8NH53 320 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 MOSPD2Q8NHP6 518 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 FNDC9Q8TBE3 224 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 KISS1RQ969F8 398 aaPredicted RBP8.55□□□□□ -1.04
MRPL55-204ENST00000348259 NMD3Q96D46 503 aaKnown RBP8.55□□□□□ -1.04
MRPL55-204ENST00000348259 ZC3HAV1LQ96H79 300 aaKnown RBP8.55□□□□□ -1.04
MRPL55-204ENST00000348259 ZNF845Q96IR2 970 aaPredicted RBP8.55□□□□□ -1.04
MRPL55-204ENST00000348259 TSC22D3Q99576 134 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 MGLLQ99685 303 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 ZNF649Q9BS31 505 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 KATNB1Q9BVA0 655 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 ASPNQ9BXN1 380 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 OR10A4Q9H209 315 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 PLSCR4Q9NRQ2 329 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 DKKL1Q9UK85 242 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 MOKQ9UQ07 419 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 TRAPPC4Q9Y296 219 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 B3GALT5Q9Y2C3 310 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 HDGFL3Q9Y3E1 203 aa8.55□□□□□ -1.04
MRPL55-204ENST00000348259 LOC102725191A0A1B0GVB3 256 aa8.54□□□□□ -1.04
MRPL55-204ENST00000348259 LIPT2A6NK58 231 aa8.54□□□□□ -1.04
MRPL55-204ENST00000348259 FAM183AA6NL82 134 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms