RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 RNF215Q9Y6U7 377 aa14.13□□□□□ -0.15
PTPRU-201ENST00000345512 A0A0A6YYH2 397 aa14.13□□□□□ -0.15
PTPRU-201ENST00000345512 A6NJ64 397 aa14.13□□□□□ -0.15
PTPRU-201ENST00000345512 DUX1O43812 170 aa14.13□□□□□ -0.15
PTPRU-201ENST00000345512 PMP2P02689 132 aa14.13□□□□□ -0.15
PTPRU-201ENST00000345512 ADRB1P08588 477 aa14.13□□□□□ -0.15
PTPRU-201ENST00000345512 CDKN2AP42771 156 aaKnown RBP14.13□□□□□ -0.15
PTPRU-201ENST00000345512 POLR2HP52434 150 aaKnown RBP14.13□□□□□ -0.15
PTPRU-201ENST00000345512 IL10RAQ13651 578 aa14.13□□□□□ -0.15
PTPRU-201ENST00000345512 PWWP2BQ6NUJ5 590 aa14.13□□□□□ -0.15
PTPRU-201ENST00000345512 ADGRG3Q86Y34 549 aa14.13□□□□□ -0.15
PTPRU-201ENST00000345512 ZNF679Q8IYX0 411 aa14.13□□□□□ -0.15
PTPRU-201ENST00000345512 MUC20Q8N307 709 aaPredicted RBP14.13□□□□□ -0.15
PTPRU-201ENST00000345512 KLF9Q13886 244 aaPredicted RBP14.12□□□□□ -0.15
PTPRU-201ENST00000345512 TMEM156Q8N614 296 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 OR1F2PQ96R84 312 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 DEFB126Q9BYW3 111 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 C1orf196B1AJZ1 125 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 RECKO95980 971 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 ANKRD34CP0C6C1 535 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 HSD11B2P80365 405 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 SNTB1Q13884 538 aaKnown RBP14.12□□□□□ -0.15
PTPRU-201ENST00000345512 PLXDC1Q8IUK5 500 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 C3orf49Q96BT1 292 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 PRSS27Q9BQR3 290 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 MTFP1Q9UDX5 166 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 ANKRD36A6QL64 1941 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 LOC107986453A0A1B0GWG9 222 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 NRG2O14511 850 aaPredicted RBP14.12□□□□□ -0.15
PTPRU-201ENST00000345512 ZP3P21754 424 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 EGR3Q06889 387 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 OR11H4Q8NGC9 324 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 ST8SIA2Q92186 375 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 CCDC74AQ96AQ1 378 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 ZNF707Q96C28 371 aaPredicted RBP14.12□□□□□ -0.15
PTPRU-201ENST00000345512 OR5B2Q96R09 309 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 CEP290O15078 2479 aa14.12□□□□□ -0.15
PTPRU-201ENST00000345512 FAM221BA6H8Z2 402 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 CAMLGP49069 296 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 DCAF7P61962 342 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 HNRNPKP61978 463 aaKnown RBP eCLIP14.11□□□□□ -0.151e-9■■■■□ 25.8
PTPRU-201ENST00000345512 C1orf140Q5VVS0 124 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 GRAMD2AQ8IUY3 354 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 SPICQ8N5J4 248 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 RFLNBQ8N5W9 214 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 OR5D18Q8NGL1 313 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 RAB3CQ96E17 227 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 LPAR4Q99677 370 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 JAM3Q9BX67 310 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 NXF5Q9H1B4 397 aaKnown RBP14.11□□□□□ -0.15
PTPRU-201ENST00000345512 ZNF304Q9HCX3 659 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 RPS10P5Q9NQ39 176 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 EHFQ9NZC4 300 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 ANKRD20A5PA0PJZ0 165 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 SLC22A23A1A5C7 686 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 C2orf72A6NCS6 295 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 GSTZ1O43708 216 aaPredicted RBP14.11□□□□□ -0.15
PTPRU-201ENST00000345512 GPANK1O95872 356 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 SERPINA5P05154 406 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 NAGAP17050 411 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 CD1CP29017 333 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 SLC17A1Q14916 467 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 EMC4Q5J8M3 183 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 ZNF626Q68DY1 528 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 LPCAT3Q6P1A2 487 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 LSMEM1Q8N8F7 131 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 HSD17B8Q92506 261 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 NKX6-2Q9C056 277 aaPredicted RBP14.11□□□□□ -0.15
PTPRU-201ENST00000345512 SCPEP1Q9HB40 452 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 RAB22AQ9UL26 194 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 A8MVM7 634 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 RIN1Q13671 783 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 TSC22D1Q15714 1073 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 ZNF74Q16587 644 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 SGPP2Q8IWX5 399 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 LINC00052Q96N35 136 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 SLC25A32Q9H2D1 315 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 PIGMQ9H3S5 423 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 HIF3AQ9Y2N7 669 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 TMEM200CA6NKL6 621 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 NPIPA2E9PIF3 369 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 NPIPA3F8WFD2 350 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 OR2F2O95006 317 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 ERGP11308 486 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 CTHP32929 405 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 FXYD4P59646 89 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 OR2F1Q13607 317 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 SLC36A2Q495M3 483 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 TMEM240Q5SV17 173 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 SLC22A24Q8N4F4 322 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 RNF141Q8WVD5 230 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 NUDCD2Q8WVJ2 157 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 TMEM59Q9BXS4 323 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 OR11A1Q9GZK7 315 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 TINAGL1Q9GZM7 467 aaPredicted RBP14.11□□□□□ -0.15
PTPRU-201ENST00000345512 DNTTIP1Q9H147 329 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 C1orf198Q9H425 327 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 FBXO4Q9UKT5 387 aa14.11□□□□□ -0.15
PTPRU-201ENST00000345512 C4orf51C9J302 202 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 MED6O75586 246 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms