RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 OR2M3Q8NG83 312 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 OR5J2Q8NH18 312 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 YIPF5Q969M3 257 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 SLC25A36Q96CQ1 311 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 ABHD1Q96SE0 405 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 DDOQ99489 341 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 PTGES2Q9H7Z7 377 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 GRHPRQ9UBQ7 328 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 SPATA2Q9UM82 520 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 VDAC3Q9Y277 283 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 PDCD5O14737 125 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 PEX14O75381 377 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 WISP1O95388 367 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 F13BP05160 661 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 SBK2P0C263 348 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 GIFP27352 417 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 MADCAM1Q13477 382 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 IL10RAQ13651 578 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 PON3Q15166 354 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 ACSM3Q53FZ2 586 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 H3F3CQ6NXT2 135 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 SIAH3Q8IW03 269 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 OR6V1Q8N148 313 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 FADS6Q8N9I5 356 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 DEFB124Q8NES8 71 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 OR4K17Q8NGC6 315 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 HAVCR2Q8TDQ0 301 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 DDIT4LQ96D03 193 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 RASD2Q96D21 266 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 Q96M85 177 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 NMNAT3Q96T66 252 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 NMNAT2Q9BZQ4 307 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 ZNF436Q9C0F3 470 aaPredicted RBP11.53□□□□□ -0.56
CLK3-201ENST00000345005 ISG20L2Q9H9L3 353 aaKnown RBP11.53□□□□□ -0.56
CLK3-201ENST00000345005 PLEKHA1Q9HB21 404 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 DLL4Q9NR61 685 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 SERINC1Q9NRX5 453 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 P4HTMQ9NXG6 502 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 SLCO1C1Q9NYB5 712 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 TAS2R5Q9NYW4 299 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 DMXL1Q9Y485 3027 aa11.52□□□□□ -0.56
CLK3-201ENST00000345005 LANCL1O43813 399 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 RAD1O60671 282 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 DXOO77932 396 aaKnown RBP11.52□□□□□ -0.57
CLK3-201ENST00000345005 OR6A2O95222 327 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 SERPINA7P05543 415 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 GYPBP06028 91 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 CLUP10909 449 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 PRKACAP17612 351 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 ZNF81P51508 661 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 GBX2P52951 348 aaPredicted RBP11.52□□□□□ -0.57
CLK3-201ENST00000345005 ACTA2P62736 377 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 ACTG2P63267 376 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 PLPPR5Q32ZL2 321 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 LGALSLQ3ZCW2 172 aaPredicted RBP11.52□□□□□ -0.57
CLK3-201ENST00000345005 UBE2NLQ5JXB2 153 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 DMKNQ6E0U4 476 aaPredicted RBP11.52□□□□□ -0.57
CLK3-201ENST00000345005 ARL9Q6T311 187 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 B3GLCTQ6Y288 498 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 TIGD4Q8IY51 512 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 SYS1Q8N2H4 156 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 SPICQ8N5J4 248 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 POMGNT2Q8NAT1 580 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 OR10H4Q8NGA5 316 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 MFSD8Q8NHS3 518 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 PAQR8Q8TEZ7 354 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 SMIM4Q8WVI0 70 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 SGCZQ96LD1 299 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 UQCC2Q9BRT2 126 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 ANGPTL4Q9BY76 406 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 POTEKPQ9BYX7 375 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 OR11A1Q9GZK7 315 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 ADGRL4Q9HBW9 690 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 HPF1Q9NWY4 346 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 AHCTF1Q8WYP5 2266 aa11.52□□□□□ -0.57
CLK3-201ENST00000345005 EP300Q09472 2414 aaPredicted RBP11.52□□□□□ -0.57
CLK3-201ENST00000345005 A0A0G2JK05 382 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 OR6C68A6NDL8 312 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 TRABD2BA6NFA1 517 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 ZNF879B4DU55 563 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 STMND1H3BQB6 276 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 M0R233 179 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 TERTO14746 1132 aaKnown RBP11.51□□□□□ -0.57
CLK3-201ENST00000345005 GFRA3O60609 400 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 CPN1P15169 458 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 GRPRP30550 384 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 EIF1P41567 113 aaKnown RBP11.51□□□□□ -0.57
CLK3-201ENST00000345005 CDKN2AP42771 156 aaKnown RBP11.51□□□□□ -0.57
CLK3-201ENST00000345005 DIO1P49895 249 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 SLC25A1P53007 311 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 DHODHQ02127 395 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 Q0VFX4 171 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 FOXF1Q12946 379 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 EXOSC2Q13868 293 aaKnown RBP11.51□□□□□ -0.57
CLK3-201ENST00000345005 GGTLC2Q14390 218 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 AANATQ16613 207 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 LEG1Q6P5S2 330 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 NR2C2APQ86WQ0 139 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 TMEM99Q8N816 258 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 WDSUB1Q8N9V3 476 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms