RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 PTH2RP49190 550 aa14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 LTBQ06643 244 aa14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 COX15Q7KZN9 410 aa14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 RND1Q92730 232 aa14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 ZNF700Q9H0M5 742 aa14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 MRPS28Q9Y2Q9 187 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 CREBL2O60519 120 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 ZNF695Q8IW36 515 aa14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 ENTHD1Q8IYW4 607 aa14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 GHSRQ92847 366 aa14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 TMEM106AQ96A25 262 aa14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 RYDENQ9NUL5 291 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 OSGIN1Q9UJX0 560 aa14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 PIGLQ9Y2B2 252 aa14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 A0A1W2PQM1 296 aa14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 ARRB2P32121 409 aa14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 OR8G1Q15617 311 aa14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 EIF2S3LQ2VIR3 472 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 TMEM59Q9BXS4 323 aa14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 GPR55Q9Y2T6 319 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-201ENST00000344626 IGHV3-64DA0A0J9YX35 117 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 ARRDC5A6NEK1 342 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 SELENOFO60613 162 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 AKAIN1P0CW23 69 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 HTR2CP28335 458 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 POU4F3Q15319 338 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 NHSL2Q5HYW2 709 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 GSG1LQ6UXU4 331 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 TEAD3Q99594 435 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 RNF32Q9H0A6 362 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 NOX4Q9NPH5 578 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 MRPL15Q9P015 296 aaKnown RBP14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 PRSS37A4D1T9 235 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 ZNF701M0R085 212 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 TK1P04183 234 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 UBBP0CG47 229 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 SRD5A2P31213 254 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 SMN1Q16637 294 aaKnown RBP14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.86□□□□□ -0.036e-8■■■■■ 50.8
SMARCA4-201ENST00000344626 PTOV1Q86YD1 416 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 H1FXQ92522 213 aaKnown RBP14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 PRRT1Q99946 306 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 EMC7Q9NPA0 242 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 FGL1Q08830 312 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 B3GLCTQ6Y288 498 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 ALG5Q9Y673 324 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 SMCO3A2RU48 225 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 NOTOA8MTQ0 251 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 SLC33A1O00400 549 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 CD83Q01151 205 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 TIGD3Q6B0B8 471 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 FJX1Q86VR8 437 aa14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 ZNF764Q96H86 408 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 DCLRE1CQ96SD1 692 aaKnown RBP14.86□□□□□ -0.03
SMARCA4-201ENST00000344626 ALG1L2C9J202 215 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 DHHO43323 396 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 ACHEP22303 614 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 KIRREL2Q6UWL6 708 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 RHOXF1Q8NHV9 184 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 KCTD12Q96CX2 325 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 SCN3AQ9NY46 2000 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 XRCC2O43543 280 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 GABRA1P14867 456 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 IL3RAP26951 378 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 MRPL19P49406 292 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 FABP6P51161 128 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 RPP30P78346 268 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 MTFR2Q6P444 385 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 CNIH2Q6PI25 160 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 OR52I1Q8NGK6 324 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 ZFAND1Q8TCF1 268 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 SLAMF6Q96DU3 332 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 COL25A1Q9BXS0 654 aaPredicted RBP14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 RDH8Q9NYR8 311 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 IL17BQ9UHF5 180 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 RNF212BA8MTL3 300 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 HIST1H1CP16403 213 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 TAS2R46P59540 309 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 RIMKLAQ8IXN7 391 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 C1orf87Q8N0U7 546 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 ASH2LQ9UBL3 628 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 K7ESF4 209 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 YES1P07947 543 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 CD40LGP29965 261 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 ZNF718Q3SXZ3 478 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 ZNF501Q96CX3 271 aaPredicted RBP14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 GABARAPL1Q9H0R8 117 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 FAM208BQ5VWN6 2430 aa14.85□□□□□ -0.03
SMARCA4-201ENST00000344626 IMPA2O14732 288 aa14.84□□□□□ -0.03
SMARCA4-201ENST00000344626 BCAS1O75363 584 aaPredicted RBP14.84□□□□□ -0.03
SMARCA4-201ENST00000344626 SPI1P17947 270 aa14.84□□□□□ -0.03
SMARCA4-201ENST00000344626 CD34P28906 385 aa14.84□□□□□ -0.03
SMARCA4-201ENST00000344626 UBE2NLQ5JXB2 153 aa14.84□□□□□ -0.03
SMARCA4-201ENST00000344626 SLC35B4Q969S0 331 aa14.84□□□□□ -0.03
SMARCA4-201ENST00000344626 FGGYQ96C11 551 aa14.84□□□□□ -0.03
SMARCA4-201ENST00000344626 ARHGDIGQ99819 225 aa14.84□□□□□ -0.03
SMARCA4-201ENST00000344626 TMEM43Q9BTV4 400 aa14.84□□□□□ -0.03
SMARCA4-201ENST00000344626 MED29Q9NX70 200 aa14.84□□□□□ -0.03
SMARCA4-201ENST00000344626 OR6C6A6NF89 314 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms