RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 PER3P56645 1201 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 CCL7P80098 99 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 C17orf67Q0P5P2 114 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 LCN10Q6JVE6 187 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 RABEPKQ7Z6M1 372 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 LINC00346Q8IVM7 164 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 OR8H3Q8N146 312 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 PLPP7Q8NBV4 271 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 ASB17Q8WXJ9 295 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 CLDN23Q96B33 292 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 APMAPQ9HDC9 416 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 B3GNT2Q9NY97 397 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 EXPH5Q8NEV8 1989 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 ANKUB1A6NFN9 424 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 PEX14O75381 377 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 ECDO95905 644 aaPredicted RBP17.37■□□□□ 0.37
COL9A3-201ENST00000343916 IGHMP01871 453 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 PSMB1P20618 241 aaKnown RBP17.37■□□□□ 0.37
COL9A3-201ENST00000343916 FOXF1Q12946 379 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 SQSTM1Q13501 440 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 ZNF248Q8NDW4 579 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 GUCD1Q96NT3 240 aa17.37■□□□□ 0.37
COL9A3-201ENST00000343916 WDR77Q9BQA1 342 aaPredicted RBP17.37■□□□□ 0.37
COL9A3-201ENST00000343916 LY6G6EA0A0G2JKS1 128 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 ANKRD20A5PA0PJZ0 165 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 SULT1B1O43704 296 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 GDF9O60383 454 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 OPN1LWP04000 364 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 FCER2P06734 321 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 POU3F1Q03052 451 aaPredicted RBP17.36■□□□□ 0.37
COL9A3-201ENST00000343916 ACY1Q03154 408 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 ROM1Q03395 351 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 INPP5JQ15735 1006 aaPredicted RBP17.36■□□□□ 0.37
COL9A3-201ENST00000343916 FDX2Q6P4F2 183 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 BIVMQ86UB2 503 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 GPR137Q96N19 417 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 NARFLQ9H6Q4 476 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 AKIRIN1Q9H9L7 192 aaPredicted RBP17.36■□□□□ 0.37
COL9A3-201ENST00000343916 EMC7Q9NPA0 242 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 KLRF1Q9NZS2 232 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 RABL2AQ9UBK7 228 aaPredicted RBP17.36■□□□□ 0.37
COL9A3-201ENST00000343916 RABL2BQ9UNT1 228 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 U3KQA8 63 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 RALGAPA1Q6GYQ0 2036 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 HSPB2A8KAH6 182 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 ACOT7O00154 380 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 ARPC1BO15143 372 aaKnown RBP17.36■□□□□ 0.37
COL9A3-201ENST00000343916 SIGLEC6O43699 453 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 TMEM127O75204 238 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 KDM4BO94953 1096 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 FOSL2P15408 326 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 EPHA8P29322 1005 aaPredicted RBP17.36■□□□□ 0.37
COL9A3-201ENST00000343916 POU3F4P49335 361 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 RIDAP52758 137 aaKnown RBP17.36■□□□□ 0.37
COL9A3-201ENST00000343916 RAG2P55895 527 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 AP3S2P59780 193 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 HSPB2Q16082 182 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 KCTD18Q6PI47 426 aaPredicted RBP17.36■□□□□ 0.37
COL9A3-201ENST00000343916 TEX261Q6UWH6 196 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 Q6ZTK2 550 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 MISPQ8IVT2 679 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 PCNPQ8WW12 178 aaKnown RBP17.36■□□□□ 0.37
COL9A3-201ENST00000343916 HGDQ93099 445 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 ACTR6Q9GZN1 396 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 U3KQ87 197 aa17.36■□□□□ 0.37
COL9A3-201ENST00000343916 WDFY4Q6ZS81 3184 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 IGHV5-10-1A0A0J9YXX1 117 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 LOC105371267A0A1B0GV96 52 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 NPIPA5E9PKD4 350 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 SLC22A5O76082 557 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 GLSO94925 669 aaPredicted RBP17.35■□□□□ 0.37
COL9A3-201ENST00000343916 CRABP1P29762 137 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 EMP2P54851 167 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 ZP1P60852 638 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 DCDP81605 110 aaKnown RBP17.35■□□□□ 0.37
COL9A3-201ENST00000343916 ANGPT1Q15389 498 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 LINC00303Q3SY05 128 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 CORO6Q6QEF8 472 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 EMC6Q9BV81 110 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 DIABLOQ9NR28 239 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 NPIPA1Q9UND3 350 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 EMC9Q9Y3B6 208 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 SIT1Q9Y3P8 196 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 TOX3O15405 576 aaPredicted RBP17.35■□□□□ 0.37
COL9A3-201ENST00000343916 SCO1O75880 301 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 TLE3Q04726 772 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 ZNF782Q6ZMW2 699 aaPredicted RBP17.35■□□□□ 0.37
COL9A3-201ENST00000343916 ZNF680Q8NEM1 530 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 OR52N5Q8NH56 324 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 NUBPLQ8TB37 319 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 ASB5Q8WWX0 329 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 ASB10Q8WXI3 467 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 ST8SIA1Q92185 356 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 DHRS9Q9BPW9 319 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 ELF5Q9UKW6 265 aaPredicted RBP17.35■□□□□ 0.37
COL9A3-201ENST00000343916 RARRES3Q9UL19 164 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 DHDHQ9UQ10 334 aa17.35■□□□□ 0.37
COL9A3-201ENST00000343916 MEIS3P1A6NDR6 274 aa17.34■□□□□ 0.37
COL9A3-201ENST00000343916 CTAG2O75638 210 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms