RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 SLC17A9Q9BYT1 436 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 NMES1Q9C002 83 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 MBNL1Q9NR56 388 aaKnown RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 SMCO4Q9NRQ5 59 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 DHCR7Q9UBM7 475 aaKnown RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 METTL1Q9UBP6 276 aaKnown RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 LAMP5Q9UJQ1 280 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 IKZF2Q9UKS7 526 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 HCFC2Q9Y5Z7 792 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 TMEM14AQ9Y6G1 99 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 TRPM6Q9BX84 2022 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 TRAV20A0A0B4J274 112 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 BLOC1S5-TXNDC5H3BN57 136 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 LATO43561 262 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 GATCO43716 136 aaKnown RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 ICOSLGO75144 302 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 GPR75O95800 540 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 S100A9P06702 114 aaKnown RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 DCNP07585 359 aaKnown RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 MUC1P15941 1255 aaPredicted RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 IGFBP3P17936 291 aaPredicted RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 PMELP40967 661 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 ARRB1P49407 418 aaPredicted RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 PMPCAQ10713 525 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 AIMP2Q13155 320 aaKnown RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 EMC4Q5J8M3 183 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 RBMS3Q6XE24 437 aaKnown RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 ADGRE4PQ86SQ3 457 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 ZNF614Q8N883 585 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 TMEM52Q8NDY8 209 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 ZCCHC10Q8TBK6 192 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 ADAMTS17Q8TE56 1095 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 C3orf49Q96BT1 292 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 ZNF775Q96BV0 537 aaPredicted RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 OR2A5Q96R48 311 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 SEC61A2Q9H9S3 476 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 CHMP1AQ9HD42 196 aaPredicted RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 TVP23AA6NH52 213 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 ELOA3DA6NLF2 546 aaPredicted RBP8.72□□□□□ -1.01
HOXA1-201ENST00000343060 FAM157AC9JC47 383 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 DCTN6O00399 190 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 CYR61O00622 381 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 NUDT21O43809 227 aaKnown RBP8.72□□□□□ -1.01
HOXA1-201ENST00000343060 DUS4LO95620 317 aaKnown RBP8.72□□□□□ -1.01
HOXA1-201ENST00000343060 RCC1P18754 421 aaPredicted RBP8.72□□□□□ -1.01
HOXA1-201ENST00000343060 AGAP20933 346 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 ZNF10P21506 573 aaPredicted RBP8.72□□□□□ -1.01
HOXA1-201ENST00000343060 S100PP25815 95 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 ABCD3P28288 659 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 PPM1AP35813 382 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 PBX2P40425 430 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 PSG6Q00889 435 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 NKPD1Q17RQ9 610 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 ELOA3BQ3SY89 546 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 AWAT2Q6E213 333 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 FBXO42Q6P3S6 717 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 KDF1Q8NAX2 398 aaPredicted RBP8.72□□□□□ -1.01
HOXA1-201ENST00000343060 ELOA3Q8NG57 546 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 FLVCR1-AS1Q8TAF5 88 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 TSEN15Q8WW01 171 aaKnown RBP8.72□□□□□ -1.01
HOXA1-201ENST00000343060 TMED6Q8WW62 240 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 AQP3Q92482 292 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 RNF126Q9BV68 326 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 ULBP3Q9BZM4 244 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 SELENOIQ9C0D9 397 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 TMEM231Q9H6L2 316 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 RHOFQ9HBH0 211 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 PRMT8Q9NR22 394 aaPredicted RBP8.72□□□□□ -1.01
HOXA1-201ENST00000343060 ASH2LQ9UBL3 628 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 PILRAQ9UKJ1 303 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 INSL6Q9Y581 213 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 OR1A2Q9Y585 309 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 CSAG2Q9Y5P2 127 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 A0A1W2PPC1 479 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 URADA6NGE7 173 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 C1orf196B1AJZ1 125 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 SMAD9O15198 467 aaKnown RBP8.72□□□□□ -1.01
HOXA1-201ENST00000343060 IGHV2-70P01814 119 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 CD5P06127 495 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 ADH1AP07327 375 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 ZNF28P17035 718 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 HTR2CP28335 458 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 AQP2P41181 271 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 CX3CR1P49238 355 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 OR7A5Q15622 319 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 ZNF74Q16587 644 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 ITPRIPL2Q3MIP1 535 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 EEF1A1P5Q5VTE0 462 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 TMEM225Q6GV28 225 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 CORO6Q6QEF8 472 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 C5orf46Q6UWT4 87 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 DEFB128Q7Z7B8 93 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 TMEM200AQ86VY9 491 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 ZNF584Q8IVC4 421 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 ZSCAN4Q8NAM6 433 aaPredicted RBP8.72□□□□□ -1.01
HOXA1-201ENST00000343060 ING5Q8WYH8 240 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 HIST1H2BAQ96A08 127 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 RRNAD1Q96FB5 475 aaKnown RBP8.72□□□□□ -1.01
HOXA1-201ENST00000343060 ZNF587Q96SQ5 575 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms