RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 SEMA4CQ9C0C4 833 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 ESRP2Q9H6T0 727 aaKnown RBP11.78□□□□□ -0.52
COL18A1-201ENST00000342220 ATRXP46100 2492 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 FREM3P0C091 2139 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 TRBV23-1A0A0A0MS06 115 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 MPC2O95563 127 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 CCL3P10147 92 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 FGF5P12034 268 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 MST1P26927 711 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 MTNR1BP49286 362 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 GABREP78334 506 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 E2F1Q01094 437 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 Q3ZCU0 254 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 SPINK14Q6IE38 97 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 CARFQ8N187 725 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 OR2Y1Q8NGV0 311 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 OR5W2Q8NH69 310 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 ZNF417Q8TAU3 575 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 SGK3Q96BR1 496 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 ZNF587Q96SQ5 575 aaPredicted RBP11.78□□□□□ -0.52
COL18A1-201ENST00000342220 MED28Q9H204 178 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 KLHL13Q9P2N7 655 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 RASD1Q9Y272 281 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 ANKRD11Q6UB99 2663 aaPredicted RBP11.77□□□□□ -0.52
COL18A1-201ENST00000342220 A0A087WUJ7 227 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 C9orf172C9J069 976 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 SIGLEC5O15389 551 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 FMO6PO60774 539 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 KLF7O75840 302 aaPredicted RBP11.77□□□□□ -0.53
COL18A1-201ENST00000342220 ANKRD34CP0C6C1 535 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 RPS4Y1P22090 263 aaKnown RBP11.77□□□□□ -0.53
COL18A1-201ENST00000342220 DCAF7P61962 342 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 SQSTM1Q13501 440 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.77□□□□□ -0.53
COL18A1-201ENST00000342220 YOD1Q5VVQ6 348 aaPredicted RBP11.77□□□□□ -0.53
COL18A1-201ENST00000342220 SLC35D2Q76EJ3 337 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 GID4Q8IVV7 300 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 MS4A15Q8N5U1 240 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 BMPERQ8N8U9 685 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 ZSCAN1Q8NBB4 408 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 OR6N2Q8NGY6 317 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 THEM6Q8WUY1 208 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 THAP7Q9BT49 309 aaPredicted RBP11.77□□□□□ -0.53
COL18A1-201ENST00000342220 COA4Q9NYJ1 87 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 MAB21L2Q9Y586 359 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 DCHS1Q96JQ0 3298 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 POM121CA8CG34 1229 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 ZNHIT1O43257 154 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 SELENOFO60613 162 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 ECDO95905 644 aaPredicted RBP11.77□□□□□ -0.53
COL18A1-201ENST00000342220 ZNF806P0C7X5 589 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 RPL18Q07020 188 aaKnown RBP11.77□□□□□ -0.53
COL18A1-201ENST00000342220 HBMQ6B0K9 141 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 ACOT12Q8WYK0 555 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 SORCS2Q96PQ0 1159 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 SEC61A2Q9H9S3 476 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 CYSLTR2Q9NS75 346 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 GNG8Q9UK08 70 aa11.77□□□□□ -0.53
COL18A1-201ENST00000342220 ARGFXA6NJG6 315 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 BHLHE40O14503 412 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 EEF1E1O43324 174 aaKnown RBP11.76□□□□□ -0.53
COL18A1-201ENST00000342220 SELLP14151 372 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 SRP9P49458 86 aaKnown RBP11.76□□□□□ -0.53
COL18A1-201ENST00000342220 PNLIPRP2P54317 469 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 POU3F1Q03052 451 aaPredicted RBP11.76□□□□□ -0.53
COL18A1-201ENST00000342220 PON3Q15166 354 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 SGCAQ16586 387 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 RNASE12Q5GAN4 147 aaKnown RBP11.76□□□□□ -0.53
COL18A1-201ENST00000342220 ZNF248Q8NDW4 579 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 KISS1RQ969F8 398 aaPredicted RBP11.76□□□□□ -0.53
COL18A1-201ENST00000342220 ORAI1Q96D31 301 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 JAM3Q9BX67 310 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 ABCG5Q9H222 651 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 TTLL8A6PVC2 850 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 H7C2Y5 167 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 TSPAN2O60636 221 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 HLA-DOBP13765 273 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 THBS2P35442 1172 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 STARP49675 285 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 P2RX1P51575 399 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 C21orf62-AS1Q17RA5 79 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 BCL2L15Q5TBC7 163 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 TMEM225Q6GV28 225 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 C17orf47Q8NEP4 570 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 RFT1Q96AA3 541 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 RBM14Q96PK6 669 aaKnown RBP11.76□□□□□ -0.53
COL18A1-201ENST00000342220 TRIM36Q9NQ86 728 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 POLE3Q9NRF9 147 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 GLS2Q9UI32 602 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 DKKL1Q9UK85 242 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 POLR1DQ9Y2S0 133 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 ANKRD61A6NGH8 418 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 SDHBP21912 280 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 ACP1P24666 158 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 RBMS1P29558 406 aaKnown RBP11.76□□□□□ -0.53
COL18A1-201ENST00000342220 SFXN4Q6P4A7 337 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 KRT74Q7RTS7 529 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 TMPRSS7Q7RTY8 843 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 CEACAM19Q7Z692 300 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 LUZP2Q86TE4 346 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms