RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 A0A096LPE4 126 aa13.34□□□□□ -0.27
RET-201ENST00000340058 A0A1W2PPZ6 126 aa13.34□□□□□ -0.27
RET-201ENST00000340058 TSPAN9O75954 239 aa13.34□□□□□ -0.27
RET-201ENST00000340058 RAB40ALP0C0E4 278 aa13.34□□□□□ -0.27
RET-201ENST00000340058 ZNF35P13682 527 aa13.34□□□□□ -0.27
RET-201ENST00000340058 ZNF93P35789 620 aaPredicted RBP13.34□□□□□ -0.27
RET-201ENST00000340058 SF3B4Q15427 424 aaKnown RBP eCLIP13.34□□□□□ -0.27
RET-201ENST00000340058 DHRS13Q6UX07 377 aa13.34□□□□□ -0.27
RET-201ENST00000340058 OR56B4Q8NH76 319 aa13.34□□□□□ -0.27
RET-201ENST00000340058 RAB40AQ8WXH6 277 aa13.34□□□□□ -0.27
RET-201ENST00000340058 ANKRD9Q96BM1 317 aaPredicted RBP13.34□□□□□ -0.27
RET-201ENST00000340058 ITPKCQ96DU7 683 aa13.34□□□□□ -0.27
RET-201ENST00000340058 ZNF681Q96N22 645 aa13.34□□□□□ -0.27
RET-201ENST00000340058 LAT2Q9GZY6 243 aa13.34□□□□□ -0.27
RET-201ENST00000340058 PCDHB16Q9NRJ7 776 aa13.34□□□□□ -0.27
RET-201ENST00000340058 EHFQ9NZC4 300 aa13.34□□□□□ -0.27
RET-201ENST00000340058 FLRT3Q9NZU0 649 aa13.34□□□□□ -0.27
RET-201ENST00000340058 MRPS28Q9Y2Q9 187 aaKnown RBP13.34□□□□□ -0.27
RET-201ENST00000340058 NOSIPQ9Y314 301 aaKnown RBP13.34□□□□□ -0.27
RET-201ENST00000340058 R4GN57 208 aa13.34□□□□□ -0.27
RET-201ENST00000340058 EPHA1P21709 976 aa13.33□□□□□ -0.27
RET-201ENST00000340058 NXPH1P58417 271 aa13.33□□□□□ -0.27
RET-201ENST00000340058 CCDC86Q9H6F5 360 aaKnown RBP13.33□□□□□ -0.27
RET-201ENST00000340058 RLFQ13129 1914 aa13.33□□□□□ -0.28
RET-201ENST00000340058 SERTM1A2A2V5 107 aa13.33□□□□□ -0.28
RET-201ENST00000340058 H7C417 338 aa13.33□□□□□ -0.28
RET-201ENST00000340058 HRGP04196 525 aa13.33□□□□□ -0.28
RET-201ENST00000340058 CSF1P09603 554 aa13.33□□□□□ -0.28
RET-201ENST00000340058 SORDQ00796 357 aa13.33□□□□□ -0.28
RET-201ENST00000340058 YIF1BQ5BJH7 314 aa13.33□□□□□ -0.28
RET-201ENST00000340058 C3orf33Q6P1S2 294 aa13.33□□□□□ -0.28
RET-201ENST00000340058 GSG1LQ6UXU4 331 aa13.33□□□□□ -0.28
RET-201ENST00000340058 MAFIPQ8WZ33 124 aa13.33□□□□□ -0.28
RET-201ENST00000340058 PLEKHB1Q9UF11 243 aaPredicted RBP13.33□□□□□ -0.28
RET-201ENST00000340058 NUP50Q9UKX7 468 aa13.33□□□□□ -0.28
RET-201ENST00000340058 PRSS37A4D1T9 235 aa13.33□□□□□ -0.28
RET-201ENST00000340058 F5H5P2 479 aa13.33□□□□□ -0.28
RET-201ENST00000340058 CCL4P13236 92 aa13.33□□□□□ -0.28
RET-201ENST00000340058 CDK2P24941 298 aa13.33□□□□□ -0.28
RET-201ENST00000340058 ETFDHQ16134 617 aa13.33□□□□□ -0.28
RET-201ENST00000340058 UBE2NLQ5JXB2 153 aa13.33□□□□□ -0.28
RET-201ENST00000340058 MISPQ8IVT2 679 aa13.33□□□□□ -0.28
RET-201ENST00000340058 ZSCAN4Q8NAM6 433 aaPredicted RBP13.33□□□□□ -0.28
RET-201ENST00000340058 MVB12AQ96EY5 273 aa13.33□□□□□ -0.28
RET-201ENST00000340058 DEFB127Q9H1M4 99 aa13.33□□□□□ -0.28
RET-201ENST00000340058 FGF20Q9NP95 211 aaPredicted RBP13.33□□□□□ -0.28
RET-201ENST00000340058 CHST11Q9NPF2 352 aa13.33□□□□□ -0.28
RET-201ENST00000340058 KCNN3Q9UGI6 736 aa13.33□□□□□ -0.28
RET-201ENST00000340058 PRAMEF27A3QJZ7 478 aa13.32□□□□□ -0.28
RET-201ENST00000340058 ARRDC5A6NEK1 342 aa13.32□□□□□ -0.28
RET-201ENST00000340058 TBX19O60806 448 aa13.32□□□□□ -0.28
RET-201ENST00000340058 PEX14O75381 377 aa13.32□□□□□ -0.28
RET-201ENST00000340058 EVX1P49640 407 aa13.32□□□□□ -0.28
RET-201ENST00000340058 AKR1C2P52895 323 aa13.32□□□□□ -0.28
RET-201ENST00000340058 ZNF616Q08AN1 781 aa13.32□□□□□ -0.28
RET-201ENST00000340058 HNF4GQ14541 408 aa13.32□□□□□ -0.28
RET-201ENST00000340058 LTC4SQ16873 150 aa13.32□□□□□ -0.28
RET-201ENST00000340058 EXOSC6Q5RKV6 272 aaKnown RBP13.32□□□□□ -0.28
RET-201ENST00000340058 RABEPKQ7Z6M1 372 aa13.32□□□□□ -0.28
RET-201ENST00000340058 CMTM4Q8IZR5 234 aa13.32□□□□□ -0.28
RET-201ENST00000340058 OR51S1Q8NGJ8 323 aa13.32□□□□□ -0.28
RET-201ENST00000340058 OR1N1Q8NGS0 311 aa13.32□□□□□ -0.28
RET-201ENST00000340058 NINJ1Q92982 152 aa13.32□□□□□ -0.28
RET-201ENST00000340058 TCEAL3Q969E4 200 aa13.32□□□□□ -0.28
RET-201ENST00000340058 ZBTB8AQ96BR9 441 aa13.32□□□□□ -0.28
RET-201ENST00000340058 PELI1Q96FA3 418 aa13.32□□□□□ -0.28
RET-201ENST00000340058 CDX2Q99626 313 aaPredicted RBP13.32□□□□□ -0.28
RET-201ENST00000340058 MMP25Q9NPA2 562 aa13.32□□□□□ -0.28
RET-201ENST00000340058 KLK11Q9UBX7 282 aa13.32□□□□□ -0.28
RET-201ENST00000340058 NXT1Q9UKK6 140 aaKnown RBP13.32□□□□□ -0.28
RET-201ENST00000340058 ANK1P16157 1881 aa13.32□□□□□ -0.28
RET-201ENST00000340058 ARGFXA6NJG6 315 aa13.32□□□□□ -0.28
RET-201ENST00000340058 ZNF705EA8MWA4 302 aaPredicted RBP13.32□□□□□ -0.28
RET-201ENST00000340058 MPZL1O95297 269 aa13.32□□□□□ -0.28
RET-201ENST00000340058 ABHD16AO95870 558 aa13.32□□□□□ -0.28
RET-201ENST00000340058 MT-ATP6P00846 226 aa13.32□□□□□ -0.28
RET-201ENST00000340058 SPINK2P20155 84 aa13.32□□□□□ -0.28
RET-201ENST00000340058 CDKN2AP42771 156 aaKnown RBP13.32□□□□□ -0.28
RET-201ENST00000340058 ZNF74Q16587 644 aa13.32□□□□□ -0.28
RET-201ENST00000340058 LAIR1Q6GTX8 287 aa13.32□□□□□ -0.28
RET-201ENST00000340058 ALKAL2Q6UX46 152 aa13.32□□□□□ -0.28
RET-201ENST00000340058 C12orf45Q8N5I9 185 aaPredicted RBP13.32□□□□□ -0.28
RET-201ENST00000340058 OR2G2Q8NGZ5 317 aa13.32□□□□□ -0.28
RET-201ENST00000340058 SMIM19Q96E16 107 aa13.32□□□□□ -0.28
RET-201ENST00000340058 OR14J1Q9UGF5 321 aa13.32□□□□□ -0.28
RET-201ENST00000340058 RGPD4Q7Z3J3 1758 aa13.32□□□□□ -0.28
RET-201ENST00000340058 FAM221AA4D161 298 aa13.32□□□□□ -0.28
RET-201ENST00000340058 CYR61O00622 381 aa13.32□□□□□ -0.28
RET-201ENST00000340058 SLC43A1O75387 559 aa13.32□□□□□ -0.28
RET-201ENST00000340058 PI3P19957 117 aa13.32□□□□□ -0.28
RET-201ENST00000340058 CAV2P51636 162 aa13.32□□□□□ -0.28
RET-201ENST00000340058 RRAS2P62070 204 aaPredicted RBP13.32□□□□□ -0.28
RET-201ENST00000340058 ROBO4Q8WZ75 1007 aa13.32□□□□□ -0.28
RET-201ENST00000340058 SLAMF6Q96DU3 332 aa13.32□□□□□ -0.28
RET-201ENST00000340058 RAB3CQ96E17 227 aa13.32□□□□□ -0.28
RET-201ENST00000340058 ABHD6Q9BV23 337 aa13.32□□□□□ -0.28
RET-201ENST00000340058 PRDM6Q9NQX0 595 aa13.32□□□□□ -0.28
RET-201ENST00000340058 BET1O15155 118 aa13.32□□□□□ -0.28
RET-201ENST00000340058 DIRAS3O95661 229 aa13.32□□□□□ -0.28
RET-201ENST00000340058 S100A6P06703 90 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms