RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 A6NCN8 305 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 ZAR1LA6NP61 321 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 FOXE1O00358 373 aaPredicted RBP7.97□□□□□ -1.13
RTN3-202ENST00000339997 RPS16P62249 146 aaKnown RBP7.97□□□□□ -1.13
RTN3-202ENST00000339997 GBX1Q14549 363 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 MFSD12Q6NUT3 480 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 ABHD17CQ6PCB6 329 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 HTR3DQ70Z44 454 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 HRASLSQ9HDD0 168 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 SMCO4Q9NRQ5 59 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 COL24A1Q17RW2 1714 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 CACNA1BQ00975 2339 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 TCRBV16S1A1N1A0A5B0 115 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 SERINC4A6NH21 518 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 PRSS44E7EML9 344 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 GPR171O14626 319 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 TUSC2O75896 110 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 CYBAP13498 195 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 HTR5AP47898 357 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 MRPL19P49406 292 aaKnown RBP7.97□□□□□ -1.13
RTN3-202ENST00000339997 PPP2CAP67775 309 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 ARHGAP19Q14CB8 494 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 TMEM41BQ5BJD5 291 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 HENMT1Q5T8I9 393 aaKnown RBP7.97□□□□□ -1.13
RTN3-202ENST00000339997 BAGE3Q86Y29 109 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 BAGE2Q86Y30 109 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 NAA11Q9BSU3 229 aaPredicted RBP7.97□□□□□ -1.13
RTN3-202ENST00000339997 SLC39A9Q9NUM3 307 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 A0A0J9YY10 115 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 TRBV11-1A0A0K0K1C0 115 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 FAM155AB1AL88 458 aaPredicted RBP7.97□□□□□ -1.13
RTN3-202ENST00000339997 FOLR1P15328 257 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 FPR3P25089 353 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 IL2RGP31785 369 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 BMPR1AP36894 532 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 DAP3P51398 398 aaKnown RBP7.97□□□□□ -1.13
RTN3-202ENST00000339997 MVDP53602 400 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 HTRA4P83105 476 aaPredicted RBP7.97□□□□□ -1.13
RTN3-202ENST00000339997 AANATQ16613 207 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 LINC00303Q3SY05 128 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 ACTBL2Q562R1 376 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 ZNF468Q5VIY5 522 aaPredicted RBP7.97□□□□□ -1.13
RTN3-202ENST00000339997 LYPD8Q6UX82 237 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 MKXQ8IYA7 352 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 OR5AS1Q8N127 324 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 CCL4L1Q8NHW4 92 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 SLC35A4Q96G79 324 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 REEP6Q96HR9 211 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 OR2A14Q96R47 310 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 NRTNQ99748 197 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 MAP3K3Q99759 626 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 TCEAL7Q9BRU2 100 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 RBM38Q9H0Z9 239 aaKnown RBP7.97□□□□□ -1.13
RTN3-202ENST00000339997 OR10A5Q9H207 317 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 P2RY12Q9H244 342 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 RAB9BQ9NP90 201 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 MBNL1Q9NR56 388 aaKnown RBP7.97□□□□□ -1.13
RTN3-202ENST00000339997 NDUFB11Q9NX14 153 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 LRIT1Q9P2V4 623 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 MMP24Q9Y5R2 645 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 KCNE3Q9Y6H6 103 aa7.97□□□□□ -1.13
RTN3-202ENST00000339997 CADP27708 2225 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 A0A1B0GTH9 108 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 TMEM212A6NML5 194 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 SIGLEC5O15389 551 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 AKR7A3O95154 331 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 NTN1O95631 604 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 SIGLEC14Q08ET2 396 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 SERTAD2Q14140 314 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 PDCD1Q15116 288 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 CLEC9AQ6UXN8 241 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 PLXDC1Q8IUK5 500 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 CDH26Q8IXH8 852 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 OR51A4Q8NGJ6 313 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 OR51A2Q8NGJ7 313 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 UBALD1Q8TB05 177 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 LMF2Q9BU23 707 aaKnown RBP7.96□□□□□ -1.13
RTN3-202ENST00000339997 MS4A7Q9GZW8 240 aaPredicted RBP7.96□□□□□ -1.13
RTN3-202ENST00000339997 DNMT3BQ9UBC3 853 aaKnown RBP7.96□□□□□ -1.13
RTN3-202ENST00000339997 SLC23A2Q9UGH3 650 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 OR52A1Q9UKL2 312 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 PTRH2Q9Y3E5 179 aaKnown RBP7.96□□□□□ -1.13
RTN3-202ENST00000339997 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 A8MXE2 369 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 PRAMEF4O60810 478 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 CD14P08571 375 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 SPINK2P20155 84 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 GABRA2P47869 451 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 GPR85P60893 370 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 GGTA1PQ4G0N0 100 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 SIGIRRQ6IA17 410 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 Q6ZRG5 221 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 DPPA2Q7Z7J5 298 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 CNEP1R1Q8N9A8 125 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 OR2G3Q8NGZ4 309 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 GPR119Q8TDV5 335 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 PPP1R1CQ8WVI7 109 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 PDXPQ96GD0 296 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 PIGQQ9BRB3 760 aa7.96□□□□□ -1.13
RTN3-202ENST00000339997 C1orf198Q9H425 327 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms