RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 PCYT1BQ9Y5K3 369 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-202ENST00000339438 TTC28Q96AY4 2481 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 RAI1Q7Z5J4 1906 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-202ENST00000339438 CDHR4A6H8M9 788 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 OR14I1A6ND48 311 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 OR52A4PA6NMU1 304 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 ACOT7O00154 380 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 ZNF197O14709 1029 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 NPC1O15118 1278 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 KDELR3O43731 214 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 FBXO24O75426 580 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 GABRG2P18507 467 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 MSX1P28360 303 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 GLP1RP43220 463 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 MRPS10P82664 201 aaKnown RBP5.05□□□□□ -1.6
CSDE1-202ENST00000339438 ZNF763Q0D2J5 394 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 SYPL1Q16563 259 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 FNDC3BQ53EP0 1204 aaKnown RBP5.05□□□□□ -1.6
CSDE1-202ENST00000339438 PIP5KL1Q5T9C9 394 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 PTRHD1Q6GMV3 140 aaKnown RBP5.05□□□□□ -1.6
CSDE1-202ENST00000339438 MRM1Q6IN84 353 aaKnown RBP5.05□□□□□ -1.6
CSDE1-202ENST00000339438 PCSK4Q6UW60 755 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 TMPPEQ6ZT21 453 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 MEPCEQ7L2J0 689 aaKnown RBP5.05□□□□□ -1.6
CSDE1-202ENST00000339438 GTPBP8Q8N3Z3 284 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-202ENST00000339438 OR10R2Q8NGX6 335 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 OR56A3Q8NH54 315 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 RAB24Q969Q5 203 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 OR14A2Q96R54 314 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 TBX5Q99593 518 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 NDUFAF3Q9BU61 184 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 PRDM7Q9NQW5 492 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 GAR1Q9NY12 217 aaKnown RBP5.05□□□□□ -1.6
CSDE1-202ENST00000339438 TAS2R10Q9NYW0 307 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 SERGEFQ9UGK8 458 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 STEAP1Q9UHE8 339 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 KCNE5Q9UJ90 142 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 ASF1AQ9Y294 204 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 GPR55Q9Y2T6 319 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-202ENST00000339438 STARD10Q9Y365 291 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 A6NCN8 305 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 SEC14L6B5MCN3 397 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 H0YIZ8 118 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 FLRT2O43155 660 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 HIST1H2BKO60814 126 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 CLDN7O95471 211 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 CRYABP02511 175 aaKnown RBP5.05□□□□□ -1.6
CSDE1-202ENST00000339438 HIST1H2BJP06899 126 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 NPSP0C0P6 89 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 TBC1D3HP0C7X1 549 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 LYL1P12980 280 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 ADRA2CP18825 462 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 SRMP19623 302 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 HIST1H2BOP23527 126 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 HIST1H2BBP33778 126 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 ATP6V1E1P36543 226 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 DLSTP36957 453 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 STAT5AP42229 794 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 HIST1H2BDP58876 126 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 CD81P60033 236 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 HIST1H2BCP62807 126 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 GAGE1Q13065 139 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 HIST2H2BEQ16778 126 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 PRRT3Q5FWE3 981 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 TMEM31Q5JXX7 168 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-202ENST00000339438 AGBL4Q5VU57 503 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 TBC1D3GQ6DHY5 549 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 IGF2-ASQ6U949 168 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 SLC22A18ASQ8N1D0 253 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 UBAC2Q8NBM4 344 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 OR56B1Q8NGI3 324 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 C16orf78Q8WTQ4 265 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 SMPDL3AQ92484 453 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 KLK6Q92876 244 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 RAB8BQ92930 207 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 HIST1H2BHQ93079 126 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 MIB2Q96AX9 1013 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 SMIM19Q96E16 107 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 AKR1E2Q96JD6 320 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 HIST1H2BNQ99877 126 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 HIST1H2BMQ99879 126 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 SUCNR1Q9BXA5 334 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 OPN3Q9H1Y3 402 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-202ENST00000339438 MYNNQ9NPC7 610 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 NRIP3Q9NQ35 241 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 SEMA5BQ9P283 1151 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 PRODH2Q9UF12 536 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 SLC25A13Q9UJS0 675 aa5.05□□□□□ -1.6
CSDE1-202ENST00000339438 UBE2QL1A1L167 161 aa5.04□□□□□ -1.6
CSDE1-202ENST00000339438 FAM86C2PA6NEL3 165 aa5.04□□□□□ -1.6
CSDE1-202ENST00000339438 LRP3O75074 770 aa5.04□□□□□ -1.6
CSDE1-202ENST00000339438 REM1O75628 298 aa5.04□□□□□ -1.6
CSDE1-202ENST00000339438 SLCO2B1O94956 709 aa5.04□□□□□ -1.6
CSDE1-202ENST00000339438 PMS2P2O95744 297 aa5.04□□□□□ -1.6
CSDE1-202ENST00000339438 PTBP3O95758 552 aaKnown RBP5.04□□□□□ -1.6
CSDE1-202ENST00000339438 AK1P00568 194 aa5.04□□□□□ -1.6
CSDE1-202ENST00000339438 F10P00742 488 aa5.04□□□□□ -1.6
CSDE1-202ENST00000339438 ADH5P11766 374 aa5.04□□□□□ -1.6
CSDE1-202ENST00000339438 ZNF7P17097 686 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms