RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 HLA-HP01893 362 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 HLA-DQA2P01906 255 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 PATE4P0C8F1 98 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 GAAP10253 952 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 CD79AP11912 226 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 AQP4P55087 323 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 ADARB1P78563 741 aaKnown RBP12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 TEKQ02763 1124 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 PIGFQ07326 219 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 KEAP1Q14145 624 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 FAM27BQ5VT28 67 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 TTC23Q5W5X9 447 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 UGT2A3Q6UWM9 527 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 BCDIN3DQ7Z5W3 292 aaKnown RBP12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 CCDC36Q8IYA8 594 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 DEPDC4Q8N2C3 294 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 ACBD4Q8NC06 268 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 OR8J1Q8NGP2 316 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 TRUB1Q8WWH5 349 aaKnown RBP12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 NANOS1Q8WY41 292 aaKnown RBP12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 ADI1Q9BV57 179 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 C1QTNF6Q9BXI9 259 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 OBP2BQ9NPH6 170 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 ZNF226Q9NYT6 803 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 H2AFY2Q9P0M6 372 aaPredicted RBP12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 PLEKHB1Q9UF11 243 aaPredicted RBP12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 MOKQ9UQ07 419 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 ZNF503-AS2A6NEH8 195 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 TVP23AA6NH52 213 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 H0YJX3 145 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 CASKO14936 926 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 GLCEO94923 617 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 UBL3O95164 117 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 TFP02787 698 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 CST2P09228 141 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 COX6B1P14854 86 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 SLC2A5P22732 501 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 COL8A1P27658 744 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 FMO3P31513 532 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 CAPGP40121 348 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 VHLP40337 213 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 RPS7P62081 194 aaKnown RBP12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 HSF2Q03933 536 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 APOFQ13790 326 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 ENDOGQ14249 297 aaKnown RBP12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 KCNMB1Q16558 191 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 MEP1BQ16820 701 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 AADACL4Q5VUY2 407 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 MDP1Q86V88 176 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 ZNF511Q8NB15 262 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 SLC26A10Q8NG04 563 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 OR10H5Q8NGA6 315 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 FGFBP3Q8TAT2 258 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 FAM222BQ8WU58 562 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 APOL4Q9BPW4 351 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 ZNF416Q9BWM5 594 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 RNF121Q9H920 327 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 RASSF1Q9NS23 344 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 ZNF224Q9NZL3 707 aa12.3□□□□□ -0.44
APOBEC3B-202ENST00000335760 C12orf71A8MTZ7 269 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 H0YAE9 185 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 PRODHO43272 600 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 CLIC3O95833 236 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 EPXP11678 715 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 ZNF823P16415 610 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 GSTT1P30711 240 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 ZNF83P51522 516 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 BLVRAP53004 296 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 SNRPGP62308 76 aaKnown RBP12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 LSM6P62312 80 aaKnown RBP12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 RAB1AP62820 205 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 SNCBQ16143 134 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 GSG1Q2KHT4 349 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 SLC36A2Q495M3 483 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 SLC35D3Q5M8T2 416 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 C1QTNF12Q5T7M4 302 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 LINC01590Q5TEZ4 76 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 NXNL2Q5VZ03 156 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 TMEM53Q6P2H8 277 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 LYPD4Q6UWN0 246 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 IZUMO2Q6UXV1 221 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 MEPCEQ7L2J0 689 aaKnown RBP12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 SSX8Q7RTT4 187 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 DPPA2Q7Z7J5 298 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 ENTHD1Q8IYW4 607 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 ZMYND19Q96E35 227 aaPredicted RBP12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 FBXO17Q96EF6 278 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 NOX3Q9HBY0 568 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 SLC24A3Q9HC58 644 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 CCNB1IP1Q9NPC3 277 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 MRPL22Q9NWU5 206 aaKnown RBP12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 B3GNT2Q9NY97 397 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 NPAP1Q9NZP6 1156 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 DNAJC27Q9NZQ0 273 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 AASSQ9UDR5 926 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 POLR1DQ9Y2S0 133 aa12.29□□□□□ -0.44
APOBEC3B-202ENST00000335760 CCDC182A6NF36 153 aa12.28□□□□□ -0.44
APOBEC3B-202ENST00000335760 MPZL2O60487 215 aa12.28□□□□□ -0.44
APOBEC3B-202ENST00000335760 RAB36O95755 333 aa12.28□□□□□ -0.44
APOBEC3B-202ENST00000335760 HRGP04196 525 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms