RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 SOX7Q9BT81 388 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 TRAF4Q9BUZ4 470 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 FBXW11Q9UKB1 542 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 GPR32O75388 356 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 SMIM13P0DJ93 91 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 HOXC12P31275 282 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 TAS2R45P59539 299 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 GHRHRQ02643 423 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF90Q03938 601 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 RNPS1Q15287 305 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 TMEM176BQ3YBM2 270 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR2AK2Q8NG84 335 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 TMEM101Q96IK0 257 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF641Q96N77 438 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 KIR3DX1Q9H7L2 352 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 GCM1Q9NP62 436 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 COL14A1Q05707 1796 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 GPR31O00270 319 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 KLF11O14901 512 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 B4GALT5O43286 388 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 LRCH4O75427 683 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 PSMB1P20618 241 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 CD1CP29017 333 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF143P52747 638 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 Q56UQ5 140 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 LBX2Q6XYB7 198 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 ADGRE4PQ86SQ3 457 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 FAM71CQ8NEG0 241 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 SORCS1Q8WY21 1168 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 OAZ3Q9UMX2 235 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 XYLBO75191 536 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 PIAS1O75925 651 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 BRS3P32247 399 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 GDF5P43026 501 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 CSNK1EP49674 416 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 PLA2G16P53816 162 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 MED1Q15648 1581 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 CD226Q15762 336 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 SAMD7Q7Z3H4 446 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 ASPGQ86U10 573 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 LCN9Q8WX39 176 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 FAM210BQ96KR6 192 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 RNF2Q99496 336 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 DLL4Q9NR61 685 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 WNK1Q9H4A3 2382 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 PXDNQ92626 1479 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZFPL1O95159 310 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 SNRPBP14678 240 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 LHX2P50458 406 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 SUB1P53999 127 aaKnown RBP eCLIP5.61□□□□□ -1.518e-6■■■□□ 15.4
CDC42BPA-201ENST00000334218 BSXQ3C1V8 233 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 IER5Q5VY09 327 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 PLEKHH3Q7Z736 793 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 RTN4RL2Q86UN3 420 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 FAM213BQ8TBF2 198 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF681Q96N22 645 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 NIPSNAP1Q9BPW8 284 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 NDFIP1Q9BT67 221 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 TMEM160Q9NX00 188 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 ST3GAL6Q9Y274 331 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 WIPI2Q9Y4P8 454 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 TMEM184BQ9Y519 407 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 GAGE1Q13065 139 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 MPEG1Q2M385 716 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 DUPD1Q68J44 220 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 NPSR1Q6W5P4 371 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 TCTN2Q96GX1 697 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 ADTRPQ96IZ2 230 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZPBPQ9BS86 351 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 LMF2Q9BU23 707 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 TWSG1Q9GZX9 223 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 TKTL2Q9H0I9 626 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 ELOVL5Q9NYP7 299 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF780BQ9Y6R6 833 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 ANKRD20A5PA0PJZ0 165 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 CCR10P46092 362 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 RGS7BPQ6MZT1 257 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 LRRC18Q8N456 261 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR1L8Q8NGR8 309 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 NANOS1Q8WY41 292 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR5P2Q8WZ92 322 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 ORAI1Q96D31 301 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 UBL7Q96S82 380 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 ICAM5Q9UMF0 924 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 P2RY10O00398 339 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 HRO43593 1189 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 YPEL1O60688 119 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 LYZL6O75951 148 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 GYPCP04921 128 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 ARSAP15289 507 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 PTGFRP43088 359 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 HTR5AP47898 357 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR12D2P58182 307 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 SF3B4Q15427 424 aaKnown RBP eCLIP5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 SPHARQ15513 63 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 UNC50Q53HI1 259 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 C6orf141Q5SZD1 244 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 FAM182AQ5T1J6 154 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 AGBL4Q5VU57 503 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 FAM46BQ96A09 425 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms