RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 H7C1C5 153 aa10.71□□□□□ -0.69
HDAC6-201ENST00000334136 NTN3O00634 580 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-201ENST00000334136 HLA-AP01891 365 aaKnown RBP10.71□□□□□ -0.69
HDAC6-201ENST00000334136 AKAIN1P0CW23 69 aa10.71□□□□□ -0.69
HDAC6-201ENST00000334136 LCN6P62502 163 aa10.71□□□□□ -0.69
HDAC6-201ENST00000334136 IL13RA1P78552 427 aa10.71□□□□□ -0.69
HDAC6-201ENST00000334136 ARHGAP11BQ3KRB8 267 aa10.71□□□□□ -0.69
HDAC6-201ENST00000334136 TEX261Q6UWH6 196 aa10.71□□□□□ -0.69
HDAC6-201ENST00000334136 IDO2Q6ZQW0 420 aa10.71□□□□□ -0.69
HDAC6-201ENST00000334136 MBOAT2Q6ZWT7 520 aa10.71□□□□□ -0.69
HDAC6-201ENST00000334136 PM20D2Q8IYS1 436 aa10.71□□□□□ -0.69
HDAC6-201ENST00000334136 RELL2Q8NC24 303 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-201ENST00000334136 LIN7BQ9HAP6 207 aa10.71□□□□□ -0.69
HDAC6-201ENST00000334136 TRAPPC4Q9Y296 219 aa10.71□□□□□ -0.69
HDAC6-201ENST00000334136 U3KQ87 197 aa10.71□□□□□ -0.69
HDAC6-201ENST00000334136 A0A1W2PS29 197 aa10.71□□□□□ -0.7
HDAC6-201ENST00000334136 RAB2AP61019 212 aa10.71□□□□□ -0.7
HDAC6-201ENST00000334136 TIGD3Q6B0B8 471 aa10.71□□□□□ -0.7
HDAC6-201ENST00000334136 UNQ6126/PRO20091Q6UXV3 157 aa10.71□□□□□ -0.7
HDAC6-201ENST00000334136 LIX1LQ8IVB5 337 aa10.71□□□□□ -0.7
HDAC6-201ENST00000334136 OR2L13Q8N349 312 aa10.71□□□□□ -0.7
HDAC6-201ENST00000334136 PNLDC1Q8NA58 520 aaKnown RBP10.71□□□□□ -0.7
HDAC6-201ENST00000334136 ARL11Q969Q4 196 aa10.71□□□□□ -0.7
HDAC6-201ENST00000334136 TMEM106AQ96A25 262 aa10.71□□□□□ -0.7
HDAC6-201ENST00000334136 UPRTQ96BW1 309 aa10.71□□□□□ -0.7
HDAC6-201ENST00000334136 GJE1A6NN92 205 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 TXNL1O43396 289 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 KNG1P01042 644 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 OPN1LWP04000 364 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 CT62P0C5K7 136 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 PNMTP11086 282 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 DPP4P27487 766 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 PNLIPRP2P54317 469 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 MAPK14Q16539 360 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 ZNF628Q5EBL2 1059 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 ZNF585AQ6P3V2 769 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 RDH10Q8IZV5 341 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 OR6N1Q8NGY5 312 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 TEAD3Q99594 435 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 AUNIPQ9H7T9 357 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 CAMK2AQ9UQM7 478 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 FRG2CA6NGY1 282 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 LGI1O95970 557 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 H2BFMP0C1H6 154 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 PPP3CBP16298 524 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 IFITM2Q01629 132 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 ZFP36L1Q07352 338 aaKnown RBP10.7□□□□□ -0.7
HDAC6-201ENST00000334136 EIF2B1Q14232 305 aaKnown RBP10.7□□□□□ -0.7
HDAC6-201ENST00000334136 ALG10Q5BKT4 473 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 NKAPLQ5M9Q1 402 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 ZBTB8AQ96BR9 441 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 HCAR1Q9BXC0 346 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 BARHL1Q9BZE3 327 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 COL4A3Q01955 1670 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 TCRBV16S1A1N1A0A5B0 115 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 FITM1A5D6W6 292 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 C1orf196B1AJZ1 125 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 CCR9P51686 369 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 RIDAP52758 137 aaKnown RBP10.7□□□□□ -0.7
HDAC6-201ENST00000334136 RASGEF1BQ0VAM2 473 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 FAM209AQ5JX71 171 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 PRAMEF8Q5VWM4 474 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 PRAMEF7Q5VXH5 474 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 WBP2NLQ6ICG8 309 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 SLC35D2Q76EJ3 337 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 GALNT16Q8N428 558 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 OR13C3Q8NGS6 347 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 GOT1L1Q8NHS2 421 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-201ENST00000334136 DDIT4LQ96D03 193 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 ZNF764Q96H86 408 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-201ENST00000334136 OR5B2Q96R09 309 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 MCCC2Q9HCC0 563 aa10.7□□□□□ -0.7
HDAC6-201ENST00000334136 C14orf166Q9Y224 244 aaKnown RBP10.7□□□□□ -0.7
HDAC6-201ENST00000334136 PRR19A6NJB7 356 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 APOC1P02654 83 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 CSF1P09603 554 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 SMIM10L1P0DMW3 83 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 ZNF250P15622 560 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 FPR3P25089 353 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 MRPL19P49406 292 aaKnown RBP10.69□□□□□ -0.7
HDAC6-201ENST00000334136 TEKQ02763 1124 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 RBMS2Q15434 407 aaKnown RBP10.69□□□□□ -0.7
HDAC6-201ENST00000334136 ACER2Q5QJU3 275 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 HACD4Q5VWC8 232 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 GLB1L2Q8IW92 636 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 DNAAF1Q8NEP3 725 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 STEAP2Q8NFT2 490 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 OR51D1Q8NGF3 324 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 PFN4Q8NHR9 129 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 SMIM10Q96HG1 83 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 LRFN5Q96NI6 719 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 NAA11Q9BSU3 229 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-201ENST00000334136 SCNM1Q9BWG6 230 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 SEMA4CQ9C0C4 833 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 EVA1AQ9H8M9 152 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 MED17Q9NVC6 651 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 KLF13Q9Y2Y9 288 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-201ENST00000334136 RGS13O14921 159 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 SGCEO43556 437 aa10.69□□□□□ -0.7
HDAC6-201ENST00000334136 CHRM4P08173 479 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms