RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 TMEM185BQ9H7F4 350 aa13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 MYOTQ9UBF9 498 aa13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 RABL2AQ9UBK7 228 aaPredicted RBP13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 RABL2BQ9UNT1 228 aa13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 PDGFBP01127 241 aaPredicted RBP13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 CFIP05156 583 aa13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 ITGA5P08648 1049 aa13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 SUMO3P55854 103 aaPredicted RBP13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 FOXK1P85037 733 aa13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 HSF1Q00613 529 aa13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 MAMSTRQ6ZN01 415 aa13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 PLPP7Q8NBV4 271 aa13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 SLC26A10Q8NG04 563 aa13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 OR11G2Q8NGC1 345 aa13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 OR5L2Q8NGL0 311 aa13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 OR5M1Q8NGP8 315 aa13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 MAFAQ8NHW3 353 aaPredicted RBP13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 DDIT4LQ96D03 193 aa13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 OR2M2Q96R28 347 aa13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 EMC6Q9BV81 110 aa13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 GAREM1Q9H706 876 aa13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 CHST11Q9NPF2 352 aa13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 AKAP7Q9P0M2 348 aaPredicted RBP13.32□□□□□ -0.28
CLCNKA-201ENST00000331433 MEN1O00255 615 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 DCTDP32321 178 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 PTGDSP41222 190 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 C6orf183Q5T699 404 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 CORO6Q6QEF8 472 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 DCXRQ7Z4W1 244 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 CATSPERDQ86XM0 798 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 OR56B4Q8NH76 319 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 KCNK17Q96T54 332 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 METTL7AQ9H8H3 244 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 EMC9Q9Y3B6 208 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 HSPB11Q9Y547 144 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 A6NIZ1 184 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 LIPT2A6NK58 231 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 SULT1B1O43704 296 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 ZFAND5O76080 213 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 DAP3P51398 398 aaKnown RBP13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 ZNF41P51814 821 aaPredicted RBP13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 RAP1BP61224 184 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 RAP1AP62834 184 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 ZP4Q12836 540 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 LYPD8Q6UX82 237 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 LILRB4Q8NHJ6 448 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 TTC9Q92623 222 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 OR10A4Q9H209 315 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 DHDHQ9UQ10 334 aa13.31□□□□□ -0.28
CLCNKA-201ENST00000331433 ZNF208O43345 1280 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 ECDO95905 644 aaPredicted RBP13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 ZNF823P16415 610 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 POU3F4P49335 361 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 MFSD13AQ14CX5 517 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 CD276Q5ZPR3 534 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 BIVMQ86UB2 503 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 PLCZ1Q86YW0 608 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 OR6S1Q8NH40 331 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 RNF138Q8WVD3 245 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 ASB5Q8WWX0 329 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 DEDD2Q8WXF8 326 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 FBXL2Q9UKC9 423 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 WIF1Q9Y5W5 379 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 ZDBF2Q9HCK1 2354 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 ANKRD20A5PA0PJZ0 165 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 CENPBD1B2RD01 187 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 ACOT7O00154 380 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 GLSO94925 669 aaPredicted RBP13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 HPXP02790 462 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 NAGAP17050 411 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 S100A1P23297 94 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 PTGS2P35354 604 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 VEGFCP49767 419 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 AP3S2P59780 193 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 MYBPHQ13203 477 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 PLPPR5Q32ZL2 321 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 CCDC92Q53HC0 331 aaPredicted RBP13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 TMEM205Q6UW68 189 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 ZNF454Q8N9F8 522 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 POC1BQ8TC44 478 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 IFI44Q8TCB0 444 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 ST7LQ8TDW4 575 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 TAS2R4Q9NYW5 299 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 STMN3Q9NZ72 180 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 EML6Q6ZMW3 1958 aa13.3□□□□□ -0.28
CLCNKA-201ENST00000331433 CNTRLQ7Z7A1 2325 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 TNRC6BQ9UPQ9 1833 aaKnown RBP13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 LOC101059948A0A1B0GTJ6 334 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 PATE3B3GLJ2 98 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 SSNA1O43805 119 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 ZNF780AO75290 641 aaPredicted RBP13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 ZNF28P17035 718 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 PSMB1P20618 241 aaKnown RBP13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 RAG2P55895 527 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 BIDP55957 195 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 TMEM225Q6GV28 225 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 LRFN4Q6PJG9 635 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 RASL10BQ96S79 203 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 GON7Q9BXV9 100 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 SERINC1Q9NRX5 453 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms