RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 CHIAQ9BZP6 476 aa14.27□□□□□ -0.12
PDGFB-201ENST00000331163 MST1P26927 711 aa14.27□□□□□ -0.13
PDGFB-201ENST00000331163 IDNKQ5T6J7 187 aa14.27□□□□□ -0.13
PDGFB-201ENST00000331163 ATG4DQ86TL0 474 aaPredicted RBP14.27□□□□□ -0.13
PDGFB-201ENST00000331163 THAP4Q8WY91 577 aa14.27□□□□□ -0.13
PDGFB-201ENST00000331163 PDCD1LG2Q9BQ51 273 aa14.27□□□□□ -0.13
PDGFB-201ENST00000331163 ELL3Q9HB65 397 aaPredicted RBP14.27□□□□□ -0.13
PDGFB-201ENST00000331163 IL20Q9NYY1 176 aa14.27□□□□□ -0.13
PDGFB-201ENST00000331163 TRAPPC4Q9Y296 219 aa14.27□□□□□ -0.13
PDGFB-201ENST00000331163 IGLV3-12A0A075B6K2 115 aa14.27□□□□□ -0.13
PDGFB-201ENST00000331163 SURF4O15260 269 aa14.27□□□□□ -0.13
PDGFB-201ENST00000331163 HRGP04196 525 aa14.27□□□□□ -0.13
PDGFB-201ENST00000331163 LTBQ06643 244 aa14.27□□□□□ -0.13
PDGFB-201ENST00000331163 TMPRSS12Q86WS5 348 aa14.27□□□□□ -0.13
PDGFB-201ENST00000331163 OR13C5Q8NGS8 318 aa14.27□□□□□ -0.13
PDGFB-201ENST00000331163 EXTL1Q92935 676 aa14.27□□□□□ -0.13
PDGFB-201ENST00000331163 WDR76Q9H967 626 aa14.27□□□□□ -0.13
PDGFB-201ENST00000331163 EIF3KQ9UBQ5 218 aaKnown RBP14.27□□□□□ -0.13
PDGFB-201ENST00000331163 ING4Q9UNL4 249 aa14.27□□□□□ -0.13
PDGFB-201ENST00000331163 PCDHGA1Q9Y5H4 931 aa14.27□□□□□ -0.13
PDGFB-201ENST00000331163 SLC30A4O14863 429 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 TLX3O43711 291 aaPredicted RBP14.26□□□□□ -0.13
PDGFB-201ENST00000331163 FADS1O60427 444 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 RRADP55042 308 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 SOX8P57073 446 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 RRAS2P62070 204 aaPredicted RBP14.26□□□□□ -0.13
PDGFB-201ENST00000331163 AIMP2Q13155 320 aaKnown RBP14.26□□□□□ -0.13
PDGFB-201ENST00000331163 MEPCEQ7L2J0 689 aaKnown RBP14.26□□□□□ -0.13
PDGFB-201ENST00000331163 GLRX5Q86SX6 157 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 LSMEM1Q8N8F7 131 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 TTC9Q92623 222 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 UFD1Q92890 307 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 IMMP1LQ96LU5 166 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 PRRX2Q99811 253 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 CDCA4Q9BXL8 241 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 GSTK1Q9Y2Q3 226 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 A0A096LPE4 126 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 TRBV2A0A0J9YWF9 115 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 A0A1W2PPZ6 126 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 SLC22A31A6NKX4 558 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 DCTN6O00399 190 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 TPOP07202 933 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 CEACAM1P13688 526 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 ZNF585AQ6P3V2 769 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 COMMD7Q86VX2 200 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 GDPD1Q8N9F7 314 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 ZNF671Q8TAW3 534 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 AKAP1Q92667 903 aaKnown RBP eCLIP14.26□□□□□ -0.13
PDGFB-201ENST00000331163 SGCZQ96LD1 299 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 CNN2Q99439 309 aaKnown RBP14.26□□□□□ -0.13
PDGFB-201ENST00000331163 B3GAT2Q9NPZ5 323 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 FREM1Q5H8C1 2179 aa14.26□□□□□ -0.13
PDGFB-201ENST00000331163 C1QBP02746 253 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 CD63P08962 238 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 GABRB1P18505 474 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 MLF1P58340 268 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 EGR4Q05215 589 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 FAM27D1Q5T7N8 215 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 ZNF767PQ75MW2 155 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 H1FNTQ75WM6 255 aaPredicted RBP14.25□□□□□ -0.13
PDGFB-201ENST00000331163 OR2T4Q8NH00 348 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 SLC25A46Q96AG3 418 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 DDA1Q9BW61 102 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 RALYQ9UKM9 306 aaKnown RBP14.25□□□□□ -0.13
PDGFB-201ENST00000331163 A0A1W2PR80 420 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 TMEM200CA6NKL6 621 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 ZNF593O00488 134 aaPredicted RBP14.25□□□□□ -0.13
PDGFB-201ENST00000331163 PLATP00750 562 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 MEOX1P50221 254 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 STK11Q15831 433 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 MEDAGQ5VYS4 303 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 OR2AJ1Q8NGZ0 328 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 NPRL2Q8WTW4 380 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 GPR87Q9BY21 358 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 CLEC4MQ9H2X3 399 aaPredicted RBP14.25□□□□□ -0.13
PDGFB-201ENST00000331163 NUDT15Q9NV35 164 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 SEMA5BQ9P283 1151 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 PLEKHB1Q9UF11 243 aaPredicted RBP14.25□□□□□ -0.13
PDGFB-201ENST00000331163 IGHV3-64DA0A0J9YX35 117 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 ATP6V1G2-DDX39BF2Z307 99 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 ACOT7O00154 380 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 GALNSP34059 522 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 BTN1A1Q13410 526 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 SULF2Q8IWU5 870 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 ANGPTL6Q8NI99 470 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 ELP5Q8TE02 316 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 TM9SF4Q92544 642 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 PTP4A1Q93096 173 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 RBFOX1Q9NWB1 397 aaKnown RBP14.25□□□□□ -0.13
PDGFB-201ENST00000331163 RDH8Q9NYR8 311 aa14.25□□□□□ -0.13
PDGFB-201ENST00000331163 SYNGR4O95473 234 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 PAHP00439 452 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 HPP00738 406 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 WT1P19544 449 aaPredicted RBP14.24□□□□□ -0.13
PDGFB-201ENST00000331163 RAB14P61106 215 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 NHLH1Q02575 133 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 ZNF766Q5HY98 468 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 LAMTOR1Q6IAA8 161 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 ZNF100Q8IYN0 542 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 WDSUB1Q8N9V3 476 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms