RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 PRSS44E7EML9 344 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 EIF1P41567 113 aaKnown RBP9.3□□□□□ -0.92
CHD3-201ENST00000330494 RPL27P61353 136 aaKnown RBP9.3□□□□□ -0.92
CHD3-201ENST00000330494 AGERQ15109 404 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 ANGPTL5Q86XS5 388 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 SUMF2Q8NBJ7 301 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 SPIN2AQ99865 258 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 SPIN2BQ9BPZ2 258 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 PPP1R14DQ9NXH3 145 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 A0A0B4J2A0 478 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 UPK1AO00322 258 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 DSCR3O14972 297 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 FAM157BP0CG42 384 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 ARL6IP1Q15041 203 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 ANKRD16Q6P6B7 361 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 CELF2-AS1Q8N7Q2 184 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 OLIG1Q8TAK6 271 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 HAS2Q92819 552 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 APH1AQ96BI3 265 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 CTSFQ9UBX1 484 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 SHPKQ9UHJ6 478 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 GPR160Q9UJ42 338 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 NAP1L6A6NFF2 107 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 EIF1BO60739 113 aaKnown RBP9.3□□□□□ -0.92
CHD3-201ENST00000330494 ITGB2P05107 769 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 RAB40ALP0C0E4 278 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 SBK3P0C264 359 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 CAPZBP47756 277 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 TMEM179BQ7Z7N9 219 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 RAB40AQ8WXH6 277 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 SCGB2A1O75556 95 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 LPLP06858 475 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 GLI4P10075 376 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 ZNF169Q14929 603 aaPredicted RBP9.3□□□□□ -0.92
CHD3-201ENST00000330494 SYT14P1Q58G82 188 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 ROBO4Q8WZ75 1007 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 MRI1Q9BV20 369 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 TEX101Q9BY14 249 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 SLC38A1Q9H2H9 487 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 R4GN57 208 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 DOCK3Q8IZD9 2030 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 TMEM82A0PJX8 343 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 ANKRD34BA5PLL1 514 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 SYT5O00445 386 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 LILRB5O75023 590 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 TSFMP43897 325 aaKnown RBP9.3□□□□□ -0.92
CHD3-201ENST00000330494 CCR5P51681 352 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 OR5M9Q8NGP3 310 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 OR11L1Q8NGX0 322 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 ZFAND1Q8TCF1 268 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 C22orf15Q8WYQ4 148 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 TAAR8Q969N4 342 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 SLCO4A1Q96BD0 722 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 NIPAL2Q9H841 368 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 DIMT1Q9UNQ2 313 aaKnown RBP9.3□□□□□ -0.92
CHD3-201ENST00000330494 RGPD4Q7Z3J3 1758 aa9.3□□□□□ -0.92
CHD3-201ENST00000330494 CD22P20273 847 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 HOXA1P49639 335 aaPredicted RBP9.29□□□□□ -0.92
CHD3-201ENST00000330494 PMPCAQ10713 525 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 RAB31Q13636 194 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 FXNQ16595 210 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 Q499Y3 187 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 AVPI1Q5T686 147 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 OR51E1Q8TCB6 317 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 HAVCR2Q8TDQ0 301 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 LIPHQ8WWY8 451 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 TEAD3Q99594 435 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 NT5DC2Q9H857 520 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 TMEM9BQ9NQ34 198 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 KCNE3Q9Y6H6 103 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 SPAG17Q6Q759 2223 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 DNAJB6O75190 326 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 NSA2O95478 260 aaKnown RBP9.29□□□□□ -0.92
CHD3-201ENST00000330494 ZNF468Q5VIY5 522 aaPredicted RBP9.29□□□□□ -0.92
CHD3-201ENST00000330494 GLIPR1L1Q6UWM5 242 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 OR2A1Q8NGT9 310 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 UCN3Q969E3 161 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 VPS25Q9BRG1 176 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 COL5A3P25940 1745 aaPredicted RBP9.29□□□□□ -0.92
CHD3-201ENST00000330494 A0A0B4J203 849 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 C5orf49A4QMS7 147 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 BDH1Q02338 343 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 SPEM2Q0P670 501 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 PEA15Q15121 130 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 SIAH3Q8IW03 269 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 ANKRD19PQ9H560 264 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 CHST11Q9NPF2 352 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 NGBQ9NPG2 151 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 F5P12259 2224 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 SLC16A6O15403 523 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 TAS2R46P59540 309 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 OGFOD3Q6PK18 319 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 TMEM92Q6UXU6 159 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 PRSS41Q7RTY9 318 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 TMEM217Q8N7C4 229 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 AMER3Q8N944 861 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 C2CD4CQ8TF44 421 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 FAM3DQ96BQ1 224 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 EVA1AQ9H8M9 152 aa9.29□□□□□ -0.92
CHD3-201ENST00000330494 DUSP22Q9NRW4 184 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms