RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 LRRC37A5PQ49AS3 106 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 FAM74A1Q5RGS3 127 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 EEF1A1P5Q5VTE0 462 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 RGS7BPQ6MZT1 257 aaPredicted RBP15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 TMEM184AQ6ZMB5 413 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 TMPRSS9Q7Z410 1059 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 RLN3Q8WXF3 142 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 MARC2Q969Z3 335 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 PNPLA2Q96AD5 504 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 TGM7Q96PF1 710 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 PTDSS2Q9BVG9 487 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 SLC19A3Q9BZV2 496 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 TINAGL1Q9GZM7 467 aaPredicted RBP15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 POFUT1Q9H488 388 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 B9D1Q9UPM9 204 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 TMEM212A6NML5 194 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 SLC16A7O60669 478 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 ALOX12BO75342 701 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 NUP62P37198 522 aaPredicted RBP15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 GALNT16Q8N428 558 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 PTPMT1Q8WUK0 201 aaPredicted RBP15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 NKD1Q969G9 470 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 MCHR2Q969V1 340 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 DCBLD2Q96PD2 775 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 KIF25Q9UIL4 384 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 RPH3AQ9Y2J0 694 aaPredicted RBP15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 VPS13AQ96RL7 3174 aa15.67■□□□□ 0.1
PTP4A3-201ENST00000329397 LMX1BO60663 402 aa15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 RLN2P04090 185 aa15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 FAUP35544 74 aaKnown RBP15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 YPEL5P62699 121 aa15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 IGLV3-21P80748 117 aaPredicted RBP15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 TSSK4Q6SA08 328 aa15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 OTOSQ8NHW6 89 aa15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 UTP23Q9BRU9 249 aaKnown RBP15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 OR11A1Q9GZK7 315 aa15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 EVA1AQ9H8M9 152 aa15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 DZANK1Q9NVP4 752 aa15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 TAS2R4Q9NYW5 299 aa15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 FARSAQ9Y285 508 aaKnown RBP15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 GABRA1P14867 456 aa15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 PRSS3P35030 304 aa15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 BEX5Q5H9J7 111 aa15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 GSG1LQ6UXU4 331 aa15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 OR1J4Q8NGS1 313 aa15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 METTL21AQ8WXB1 218 aa15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 LRRC61Q9BV99 259 aa15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 EXOSC3Q9NQT5 275 aaKnown RBP15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 MRPL22Q9NWU5 206 aaKnown RBP15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 COL4A2P08572 1712 aa15.66■□□□□ 0.1
PTP4A3-201ENST00000329397 IGHV5-51A0A0C4DH38 117 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 FAM221BA6H8Z2 402 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 CCSO14618 274 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 LDOC1O95751 146 aaPredicted RBP15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 AKAIN1P0CW23 69 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 CTLA4P16410 223 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 CD1CP29017 333 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 EFNA3P52797 238 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 SLC37A1P57057 533 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 ZP2Q05996 745 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 BIKQ13323 160 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 RAB11BQ15907 218 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 ACKR1Q16570 336 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 MOGAT2Q3SYC2 334 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 GLYATL3Q5SZD4 288 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 STEAP1BQ6NZ63 245 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 GPR160Q9UJ42 338 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 SPTY2D1-AS1A0A0U1RR47 76 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 SLC22A23A1A5C7 686 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 XKRYO14609 159 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 PPP3CBP16298 524 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 ZNF28P17035 718 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 ACHEP22303 614 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 RABIFP47224 123 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 SPOCK1Q08629 439 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 ATXN7L3Q14CW9 347 aaPredicted RBP15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 NKPD1Q17RQ9 610 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 FBXO46Q6PJ61 603 aaPredicted RBP15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 DNM1P46Q6ZS02 220 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 BOLLQ8N9W6 283 aaKnown RBP15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 OR4S1Q8NGB4 309 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 OR6N1Q8NGY5 312 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 MTIF3Q9H2K0 278 aaKnown RBP15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 NKX2-4Q9H2Z4 354 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 APMAPQ9HDC9 416 aa15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 DHCR7Q9UBM7 475 aaKnown RBP15.65■□□□□ 0.1
PTP4A3-201ENST00000329397 LOC101059948A0A1B0GTJ6 334 aa15.64■□□□□ 0.09
PTP4A3-201ENST00000329397 FITM1A5D6W6 292 aa15.64■□□□□ 0.09
PTP4A3-201ENST00000329397 NSA2O95478 260 aaKnown RBP15.64■□□□□ 0.09
PTP4A3-201ENST00000329397 CSF1P09603 554 aa15.64■□□□□ 0.09
PTP4A3-201ENST00000329397 SELLP14151 372 aa15.64■□□□□ 0.09
PTP4A3-201ENST00000329397 CXCR1P25024 350 aa15.64■□□□□ 0.09
PTP4A3-201ENST00000329397 FNTBP49356 437 aa15.64■□□□□ 0.09
PTP4A3-201ENST00000329397 ADAM8P78325 824 aa15.64■□□□□ 0.09
PTP4A3-201ENST00000329397 SCGB2B2Q4G0G5 96 aa15.64■□□□□ 0.09
PTP4A3-201ENST00000329397 LIN54Q6MZP7 749 aa15.64■□□□□ 0.09
PTP4A3-201ENST00000329397 Q6ZS52 159 aa15.64■□□□□ 0.09
PTP4A3-201ENST00000329397 TTLL10Q6ZVT0 673 aa15.64■□□□□ 0.09
PTP4A3-201ENST00000329397 CLEC1AQ8NC01 280 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms