RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 IFNGR2P38484 337 aa23.79■■□□□ 1.4
ATPAF1-201ENST00000329231 PDLIM4P50479 330 aa23.79■■□□□ 1.4
ATPAF1-201ENST00000329231 DPY19L2P2Q6ZN68 376 aa23.79■■□□□ 1.4
ATPAF1-201ENST00000329231 ZER1Q7Z7L7 766 aa23.79■■□□□ 1.4
ATPAF1-201ENST00000329231 POP5Q969H6 163 aaKnown RBP23.79■■□□□ 1.4
ATPAF1-201ENST00000329231 POM121Q96HA1 1249 aa23.79■■□□□ 1.4
ATPAF1-201ENST00000329231 MRPL37Q9BZE1 423 aaKnown RBP23.79■■□□□ 1.4
ATPAF1-201ENST00000329231 TEX13CA0A0J9YWL9 993 aa23.78■■□□□ 1.4
ATPAF1-201ENST00000329231 TCRBV5S2A0A599 114 aa23.78■■□□□ 1.4
ATPAF1-201ENST00000329231 OR10H3O60404 316 aa23.78■■□□□ 1.4
ATPAF1-201ENST00000329231 CST2P09228 141 aa23.78■■□□□ 1.4
ATPAF1-201ENST00000329231 LAP3P28838 519 aa23.78■■□□□ 1.4
ATPAF1-201ENST00000329231 PCBD1P61457 104 aa23.78■■□□□ 1.4
ATPAF1-201ENST00000329231 KRR1Q13601 381 aaKnown RBP23.78■■□□□ 1.4
ATPAF1-201ENST00000329231 MSMPQ1L6U9 139 aa23.78■■□□□ 1.4
ATPAF1-201ENST00000329231 SMARCD3Q6STE5 483 aa23.78■■□□□ 1.4
ATPAF1-201ENST00000329231 THSD4Q6ZMP0 1018 aa23.78■■□□□ 1.4
ATPAF1-201ENST00000329231 PAQR4Q8N4S7 273 aaPredicted RBP23.78■■□□□ 1.4
ATPAF1-201ENST00000329231 NEU4Q8WWR8 484 aaPredicted RBP23.78■■□□□ 1.4
ATPAF1-201ENST00000329231 CCDC124Q96CT7 223 aaKnown RBP23.78■■□□□ 1.4
ATPAF1-201ENST00000329231 GPA33Q99795 319 aa23.78■■□□□ 1.4
ATPAF1-201ENST00000329231 IL20RAQ9UHF4 553 aa23.78■■□□□ 1.4
ATPAF1-201ENST00000329231 NF1P21359 2839 aa23.78■■□□□ 1.4
ATPAF1-201ENST00000329231 SYNGR3O43761 229 aa23.77■■□□□ 1.4
ATPAF1-201ENST00000329231 KRT36O76013 467 aa23.77■■□□□ 1.4
ATPAF1-201ENST00000329231 STAMBPO95630 424 aa23.77■■□□□ 1.4
ATPAF1-201ENST00000329231 TP53P04637 393 aaPredicted RBP23.77■■□□□ 1.4
ATPAF1-201ENST00000329231 MSR1P21757 451 aa23.77■■□□□ 1.4
ATPAF1-201ENST00000329231 APEX1P27695 318 aaKnown RBP23.77■■□□□ 1.4
ATPAF1-201ENST00000329231 PCSK6P29122 969 aa23.77■■□□□ 1.4
ATPAF1-201ENST00000329231 RAD52P43351 418 aa23.77■■□□□ 1.4
ATPAF1-201ENST00000329231 RPS6KA3P51812 740 aa23.77■■□□□ 1.4
ATPAF1-201ENST00000329231 FXYD6P3P58550 94 aa23.77■■□□□ 1.4
ATPAF1-201ENST00000329231 TRAP1Q12931 704 aaKnown RBP23.77■■□□□ 1.4
ATPAF1-201ENST00000329231 RGS7BPQ6MZT1 257 aaPredicted RBP23.77■■□□□ 1.4
ATPAF1-201ENST00000329231 CPEB3Q8NE35 698 aaKnown RBP23.77■■□□□ 1.4
ATPAF1-201ENST00000329231 RASD2Q96D21 266 aa23.77■■□□□ 1.4
ATPAF1-201ENST00000329231 SYT3Q9BQG1 590 aa23.77■■□□□ 1.4
ATPAF1-201ENST00000329231 TIMM10BQ9Y5J6 103 aa23.77■■□□□ 1.4
ATPAF1-201ENST00000329231 IER3IP1Q9Y5U9 82 aa23.77■■□□□ 1.4
ATPAF1-201ENST00000329231 M0R233 179 aa23.76■■□□□ 1.39
ATPAF1-201ENST00000329231 NDUFS8O00217 210 aa23.76■■□□□ 1.39
ATPAF1-201ENST00000329231 DNAJC8O75937 253 aaPredicted RBP23.76■■□□□ 1.39
ATPAF1-201ENST00000329231 ADRA2AP08913 450 aa23.76■■□□□ 1.39
ATPAF1-201ENST00000329231 FAM157BP0CG42 384 aa23.76■■□□□ 1.39
ATPAF1-201ENST00000329231 FPR3P25089 353 aa23.76■■□□□ 1.39
ATPAF1-201ENST00000329231 STOMP27105 288 aa23.76■■□□□ 1.39
ATPAF1-201ENST00000329231 PGM2L1Q6PCE3 622 aa23.76■■□□□ 1.39
ATPAF1-201ENST00000329231 ADCK1Q86TW2 530 aa23.76■■□□□ 1.39
ATPAF1-201ENST00000329231 ALDH16A1Q8IZ83 802 aa23.76■■□□□ 1.39
ATPAF1-201ENST00000329231 FANK1Q8TC84 345 aa23.76■■□□□ 1.39
ATPAF1-201ENST00000329231 LRGUKQ96M69 825 aa23.76■■□□□ 1.39
ATPAF1-201ENST00000329231 BCL2L14Q9BZR8 327 aa23.76■■□□□ 1.39
ATPAF1-201ENST00000329231 POLE4Q9NR33 117 aa23.76■■□□□ 1.39
ATPAF1-201ENST00000329231 REV1Q9UBZ9 1251 aa23.76■■□□□ 1.39
ATPAF1-201ENST00000329231 A0A096LNT2 108 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 LOC390937A0A1W2PQ73 354 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 C12orf71A8MTZ7 269 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 ACOT8O14734 319 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 ATP5HO75947 161 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 APEHP13798 732 aaKnown RBP23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 UCP2P55851 309 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 SELENOVP59797 346 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 PPP2R2BQ00005 443 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 PSG4Q00888 419 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 KRTAP1-1Q07627 177 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 LOXL1Q08397 574 aaPredicted RBP23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 SYT9Q86SS6 491 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 ZCCHC24Q8N2G6 241 aaKnown RBP23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 AKR7LQ8NHP1 331 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 PIMREGQ9BSJ6 248 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 WACQ9BTA9 647 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 TRIM15Q9C019 465 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 OR2H1Q9GZK4 316 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 MS4A5Q9H3V2 200 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 MAGIXQ9H6Y5 334 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 DUSP13Q9UII6 198 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 FZR1Q9UM11 496 aa23.75■■□□□ 1.39
ATPAF1-201ENST00000329231 HIVEP2P31629 2446 aa23.74■■□□□ 1.39
ATPAF1-201ENST00000329231 TLN2Q9Y4G6 2542 aa23.74■■□□□ 1.39
ATPAF1-201ENST00000329231 SOCS2O14508 198 aa23.74■■□□□ 1.39
ATPAF1-201ENST00000329231 TXNDC12O95881 172 aa23.74■■□□□ 1.39
ATPAF1-201ENST00000329231 LCKP06239 509 aa23.74■■□□□ 1.39
ATPAF1-201ENST00000329231 CCNOP22674 350 aa23.74■■□□□ 1.39
ATPAF1-201ENST00000329231 SLC6A6P31641 620 aa23.74■■□□□ 1.39
ATPAF1-201ENST00000329231 MAGEA2P43356 314 aa23.74■■□□□ 1.39
ATPAF1-201ENST00000329231 RASSF2P50749 326 aa23.74■■□□□ 1.39
ATPAF1-201ENST00000329231 HMGA2P52926 109 aa23.74■■□□□ 1.39
ATPAF1-201ENST00000329231 CARTPTQ16568 116 aa23.74■■□□□ 1.39
ATPAF1-201ENST00000329231 RFX4Q33E94 735 aa23.74■■□□□ 1.39
ATPAF1-201ENST00000329231 GNPDA2Q8TDQ7 276 aa23.74■■□□□ 1.39
ATPAF1-201ENST00000329231 ZNF416Q9BWM5 594 aa23.74■■□□□ 1.39
ATPAF1-201ENST00000329231 SYT4Q9H2B2 425 aa23.74■■□□□ 1.39
ATPAF1-201ENST00000329231 OR51B6Q9H340 312 aa23.74■■□□□ 1.39
ATPAF1-201ENST00000329231 OR52D1Q9H346 318 aa23.74■■□□□ 1.39
ATPAF1-201ENST00000329231 VSX1Q9NZR4 365 aaPredicted RBP23.74■■□□□ 1.39
ATPAF1-201ENST00000329231 NIPBLQ6KC79 2804 aaeCLIP23.73■■□□□ 1.39
ATPAF1-201ENST00000329231 KHDRBS3O75525 346 aaKnown RBP23.73■■□□□ 1.39
ATPAF1-201ENST00000329231 CTLA4P16410 223 aa23.73■■□□□ 1.39
ATPAF1-201ENST00000329231 GDI2P50395 445 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms