RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 ZNF727A8MUV8 499 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 ACOT7O00154 380 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 ZNF208O43345 1280 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 CLDN7O95471 211 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 RPN2P04844 631 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 TRGC1P0CF51 173 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 IRF2P14316 349 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 TBPP20226 339 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 RAB6AP20340 208 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 CDK2P24941 298 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 MAPK8P45983 427 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 RPL29P47914 159 aaKnown RBP10.76□□□□□ -0.69
SHMT2-201ENST00000328923 OR5I1Q13606 314 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 RAB35Q15286 201 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 BTNL8Q6UX41 500 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 TAS1R1Q7RTX1 841 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 GKN2Q86XP6 184 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 FIBINQ8TAL6 211 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 CD300LFQ8TDQ1 290 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 SKA2Q8WVK7 121 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-201ENST00000328923 PLD4Q96BZ4 506 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 SAT2Q96F10 170 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-201ENST00000328923 LYSMD1Q96S90 227 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 SYT4Q9H2B2 425 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 OR2S2Q9NQN1 319 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 SUSD2Q9UGT4 822 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 A0A0U1RQV5 110 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 TMEM269A0A1B0GVZ9 245 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 UMAD1C9J7I0 102 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 TMEM238C9JI98 176 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 LRP3O75074 770 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 SLC2A10O95528 541 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 CYB5R3P00387 301 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-201ENST00000328923 CD82P27701 267 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 PDX1P52945 283 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 SLC37A1P57057 533 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 MRM1Q6IN84 353 aaKnown RBP10.76□□□□□ -0.69
SHMT2-201ENST00000328923 FAM71E1Q6IPT2 247 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 CFAP161Q6P656 301 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 TEX38Q6PEX7 206 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 KCTD9Q7L273 389 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 AMER3Q8N944 861 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 OR1J2Q8NGS2 313 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 Q8WTZ3 238 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 MUCL1Q96DR8 90 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 OR5B2Q96R09 309 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 OR14A2Q96R54 314 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 ACTR3CQ9C0K3 210 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-201ENST00000328923 AMDHD2Q9Y303 409 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 FBXO7Q9Y3I1 522 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 URGCP-MRPS24S4R325 110 aa10.76□□□□□ -0.69
SHMT2-201ENST00000328923 PLPP2O43688 288 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 CXCL10P02778 98 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 PGA3P0DJD8 388 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 FAUP35544 74 aaKnown RBP10.75□□□□□ -0.69
SHMT2-201ENST00000328923 SOAT1P35610 550 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 ERVFC1-1P60608 527 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 NAAAQ02083 359 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 SRSF5Q13243 272 aaKnown RBP10.75□□□□□ -0.69
SHMT2-201ENST00000328923 C4orf17Q53FE4 359 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 MED27Q6P2C8 311 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 KIRREL2Q6UWL6 708 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 LCTLQ6UWM7 567 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 SLC39A5Q6ZMH5 540 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 CD163Q86VB7 1156 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 OR4K17Q8NGC6 315 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 OR4K14Q8NGD5 310 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 SYNPRQ8TBG9 265 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 ADAMTS17Q8TE56 1095 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 ABHD5Q8WTS1 349 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 THAP3Q8WTV1 239 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-201ENST00000328923 SLC38A5Q8WUX1 472 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 ARSGQ96EG1 525 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 NEURL3Q96EH8 262 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 FAM210BQ96KR6 192 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 PGLYRP3Q96LB9 341 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 GPR173Q9NS66 373 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 TEX13DA0A0J9YY54 714 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-201ENST00000328923 LNP1A1A4G5 178 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 MEIS3P1A6NDR6 274 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 FAM171A2A8MVW0 826 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 H7C4K7 107 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 ZNF432O94892 652 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 CD34P28906 385 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 SGSHP51688 502 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 EIF5AP63241 154 aaKnown RBP10.75□□□□□ -0.69
SHMT2-201ENST00000328923 MOGAT2Q3SYC2 334 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 PRAMEF17Q5VTA0 474 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 DEFB128Q7Z7B8 93 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 LSRQ86X29 649 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-201ENST00000328923 ACBD7Q8N6N7 88 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 NKAIN3Q8N8D7 197 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 ADPRHL1Q8NDY3 354 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 OR5K2Q8NHB8 316 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 DCUN1D4Q92564 292 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 FRZBQ92765 325 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 GHSRQ92847 366 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 DVL3Q92997 716 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-201ENST00000328923 RRNAD1Q96FB5 475 aaKnown RBP10.75□□□□□ -0.69
SHMT2-201ENST00000328923 C1orf198Q9H425 327 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms