RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 SLC22A23A1A5C7 686 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 E9PI62 339 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 RGS9O75916 674 aaPredicted RBP16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 CRABP1P29762 137 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 S100A5P33763 92 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 POU3F1Q03052 451 aaPredicted RBP16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 ABLIM2Q6H8Q1 611 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 LYPD4Q6UWN0 246 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 NHLRC1Q6VVB1 395 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 CDC20BQ86Y33 519 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 MFSD4AQ8N468 514 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 ASB10Q8WXI3 467 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 PELI1Q96FA3 418 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 OXGR1Q96P68 337 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 HDHD5Q9BXW7 423 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 ST6GALNAC2Q9UJ37 374 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 TMEM14AQ9Y6G1 99 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 CACNA1BQ00975 2339 aa16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 OR14I1A6ND48 311 aa16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 SYNGR4O95473 234 aa16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 BMP4P12644 408 aa16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 TP53I3Q53FA7 332 aa16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 ZNF684Q5T5D7 378 aa16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 TMEM91Q6ZNR0 172 aa16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 SLC35D2Q76EJ3 337 aa16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 FCRLAQ7L513 359 aa16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 WDFY1Q8IWB7 410 aa16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 UEVLDQ8IX04 471 aa16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 MS4A15Q8N5U1 240 aa16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 FNDC9Q8TBE3 224 aa16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 WBP1Q96G27 269 aa16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 INTS14Q96SY0 518 aa16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 BARHL1Q9BZE3 327 aa16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 RERGLQ9H628 205 aa16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 SNTG1Q9NSN8 517 aa16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 PAQR5Q9NXK6 330 aaPredicted RBP16.65■□□□□ 0.26
EXOSC3-201ENST00000327304 TTLL8A6PVC2 850 aa16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 PHYHO14832 338 aa16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 TRAF3IP2O43734 574 aaPredicted RBP16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 IFNGR1P15260 489 aa16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 PTGS2P35354 604 aa16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 SIRPAP78324 504 aa16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 MRPL28Q13084 256 aaKnown RBP16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 MELKQ14680 651 aa16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 RPL22L1Q6P5R6 122 aaKnown RBP16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 ARL9Q6T311 187 aa16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 PLEKHG7Q6ZR37 379 aa16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 CHMP1BQ7LBR1 199 aa16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 TXNDC15Q96J42 360 aa16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 PGLYRP3Q96LB9 341 aa16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 WDR76Q9H967 626 aa16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 MED29Q9NX70 200 aa16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 MCTS1Q9ULC4 181 aaKnown RBP16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 IGSF10Q6WRI0 2623 aa16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 ALPK2Q86TB3 2170 aa16.64■□□□□ 0.25
EXOSC3-201ENST00000327304 IGLV1-36A0A0B4J1U3 117 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 LOC102725191A0A1B0GVB3 256 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 IQCMA0A1B0GVH7 501 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 CENPBD1B2RD01 187 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 AQP8O94778 261 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 TACSTD2P09758 323 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 SDC2P34741 201 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 RUNX1T1Q06455 604 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 SLC17A1Q14916 467 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 CDK5R1Q15078 307 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 DNM1P34Q6PK57 102 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 OR9K2Q8NGE7 335 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 ABHD3Q8WU67 409 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 SMIM19Q96E16 107 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 ADAD1Q96M93 576 aaKnown RBP16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 GNG8Q9UK08 70 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 ZNF716A6NP11 495 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 J3QRK9 145 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 SLC16A7O60669 478 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 CYTIPO60759 359 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 VAMP5O95183 116 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 ZNF43P17038 809 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 TGM4P49221 684 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 EGR3Q06889 387 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 POU4F3Q15319 338 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 C16orf87Q6PH81 154 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 RNF128Q8TEB7 428 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 DCLRE1CQ96SD1 692 aaKnown RBP16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 KCNK17Q96T54 332 aa16.63■□□□□ 0.25
EXOSC3-201ENST00000327304 TVP23AA6NH52 213 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 HSPB2A8KAH6 182 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 SC5DO75845 299 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 SULT1C4O75897 302 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 TGM6O95932 706 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 SERPINA3P01011 423 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 ALOX5APP20292 161 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 CD40LGP29965 261 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 ETV6P41212 452 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 ZNF45Q02386 682 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 SLC3A1Q07837 685 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 HSPB2Q16082 182 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 RPTNQ6XPR3 784 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 CREB3L2Q70SY1 520 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 ADGRE4PQ86SQ3 457 aa16.62■□□□□ 0.25
EXOSC3-201ENST00000327304 SYT14Q8NB59 555 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms