RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 RIPPLY1Q0D2K3 151 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 SHBQ15464 509 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 FAM166AQ6J272 317 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 DDIT4LQ96D03 193 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 CEP192Q8TEP8 1941 aa20.06■□□□□ 0.8
PNKP-201ENST00000322344 H3BSH0 61 aa20.06■□□□□ 0.8
PNKP-201ENST00000322344 ALDOBP05062 364 aa20.06■□□□□ 0.8
PNKP-201ENST00000322344 ITGA5P08648 1049 aa20.06■□□□□ 0.8
PNKP-201ENST00000322344 SSBP1Q04837 148 aaKnown RBP20.06■□□□□ 0.8
PNKP-201ENST00000322344 PLA2G7Q13093 441 aa20.06■□□□□ 0.8
PNKP-201ENST00000322344 OTPQ5XKR4 325 aa20.06■□□□□ 0.8
PNKP-201ENST00000322344 TMEM225Q6GV28 225 aa20.06■□□□□ 0.8
PNKP-201ENST00000322344 SLC25A25Q6KCM7 469 aa20.06■□□□□ 0.8
PNKP-201ENST00000322344 MAMSTRQ6ZN01 415 aa20.06■□□□□ 0.8
PNKP-201ENST00000322344 Q6ZTK2 550 aa20.06■□□□□ 0.8
PNKP-201ENST00000322344 SLC26A10Q8NG04 563 aa20.06■□□□□ 0.8
PNKP-201ENST00000322344 RNF138Q8WVD3 245 aa20.06■□□□□ 0.8
PNKP-201ENST00000322344 ASB5Q8WWX0 329 aa20.06■□□□□ 0.8
PNKP-201ENST00000322344 TTC9Q92623 222 aa20.06■□□□□ 0.8
PNKP-201ENST00000322344 TP53BP1Q12888 1972 aaPredicted RBP20.06■□□□□ 0.8
PNKP-201ENST00000322344 TMEM265A0A087WTH1 108 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 HLA-DOBP13765 273 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 C19orf57Q0VDD7 668 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 OR7A5Q15622 319 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 PCK2Q16822 640 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 C2orf76Q3KRA6 126 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 DEGS2Q6QHC5 323 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 C16orf47Q6ZP98 133 aaPredicted RBP20.05■□□□□ 0.8
PNKP-201ENST00000322344 NLRC3Q7RTR2 1065 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 FAM109AQ8N4B1 249 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 OR5L2Q8NGL0 311 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 PIGKQ92643 395 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 CLDN23Q96B33 292 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 CHST11Q9NPF2 352 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 MEGF11A6BM72 1044 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 ETV2O00321 342 aaPredicted RBP20.05■□□□□ 0.8
PNKP-201ENST00000322344 CREBL2O60519 120 aaPredicted RBP20.05■□□□□ 0.8
PNKP-201ENST00000322344 SRSF10O75494 262 aaKnown RBP20.05■□□□□ 0.8
PNKP-201ENST00000322344 AQP8O94778 261 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 CD37P11049 281 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 IGFBP3P17936 291 aaPredicted RBP20.05■□□□□ 0.8
PNKP-201ENST00000322344 RAD52P43351 418 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 PCGF3Q3KNV8 242 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 OR5M10Q6IEU7 315 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 TEX261Q6UWH6 196 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 KCNK17Q96T54 332 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 DUSP23Q9BVJ7 150 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 POTEKPQ9BYX7 375 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 IRF2BPLQ9H1B7 796 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 HHLA2Q9UM44 414 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 U3KQ87 197 aa20.05■□□□□ 0.8
PNKP-201ENST00000322344 CIB4A0PJX0 185 aa20.04■□□□□ 0.8
PNKP-201ENST00000322344 ISG15P05161 165 aa20.04■□□□□ 0.8
PNKP-201ENST00000322344 IL11P20809 199 aa20.04■□□□□ 0.8
PNKP-201ENST00000322344 SDHBP21912 280 aa20.04■□□□□ 0.8
PNKP-201ENST00000322344 ACHEP22303 614 aa20.04■□□□□ 0.8
PNKP-201ENST00000322344 MSX1P28360 303 aa20.04■□□□□ 0.8
PNKP-201ENST00000322344 CXCL12P48061 93 aa20.04■□□□□ 0.8
PNKP-201ENST00000322344 EFNB2P52799 333 aa20.04■□□□□ 0.8
PNKP-201ENST00000322344 RBMS2Q15434 407 aaKnown RBP20.04■□□□□ 0.8
PNKP-201ENST00000322344 PAPD4Q6PIY7 484 aaKnown RBP20.04■□□□□ 0.8
PNKP-201ENST00000322344 ZNF574Q6ZN55 896 aaPredicted RBP20.04■□□□□ 0.8
PNKP-201ENST00000322344 MEIOBQ8N635 442 aa20.04■□□□□ 0.8
PNKP-201ENST00000322344 OR2T35Q8NGX2 323 aa20.04■□□□□ 0.8
PNKP-201ENST00000322344 SORCS2Q96PQ0 1159 aa20.04■□□□□ 0.8
PNKP-201ENST00000322344 METTL17Q9H7H0 456 aaPredicted RBP20.04■□□□□ 0.8
PNKP-201ENST00000322344 ZNF354AO60765 605 aaPredicted RBP20.03■□□□□ 0.8
PNKP-201ENST00000322344 SNAPC5O75971 98 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 SELENOPP49908 381 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 IKZF1Q13422 519 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 ZNF626Q68DY1 528 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 ASPHD2Q6ICH7 369 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 ZNF704Q6ZNC4 412 aaPredicted RBP20.03■□□□□ 0.8
PNKP-201ENST00000322344 KDM8Q8N371 416 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 OR1J4Q8NGS1 313 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 ARL5BQ96KC2 179 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 SEC22CQ9BRL7 303 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 FANCFQ9NPI8 374 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 MED11Q9P086 117 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 ATXN7L1Q9ULK2 861 aaPredicted RBP20.03■□□□□ 0.8
PNKP-201ENST00000322344 ABCA7Q8IZY2 2146 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 TRAV18A0A075B6X5 111 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 TRBV11-1A0A0K0K1C0 115 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 A0A1W2PPC1 479 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 VSTM2BA6NLU5 285 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 K7ESF4 209 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 HRGP04196 525 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 PRSS3P35030 304 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 EMP2P54851 167 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 FOXL2P58012 376 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 DCDP81605 110 aaKnown RBP20.03■□□□□ 0.8
PNKP-201ENST00000322344 TLE3Q04726 772 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 NR0B2Q15466 257 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 FAAP20Q6NZ36 180 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 TMPRSS9Q7Z410 1059 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 SLC38A9Q8NBW4 561 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 PPP1R14AQ96A00 147 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 SLC25A28Q96A46 364 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 OR6C1Q96RD1 312 aa20.03■□□□□ 0.8
PNKP-201ENST00000322344 PRMT8Q9NR22 394 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms