RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 CRLF2Q9HC73 371 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 ANGPTL7O43827 346 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 SUSD5O60279 629 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 SLC6A8P48029 635 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 FOXK2Q01167 660 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 PRAMEF19Q5SWL8 479 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM244Q5VVB8 128 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 ARL14EPQ8N8R7 260 aaPredicted RBP6.5□□□□□ -1.37
SMC1A-201ENST00000322213 MITD1Q8WV92 249 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 SENP5Q96HI0 755 aaPredicted RBP6.5□□□□□ -1.37
SMC1A-201ENST00000322213 PDCD1LG2Q9BQ51 273 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 PATZ1Q9HBE1 687 aaKnown RBP6.5□□□□□ -1.37
SMC1A-201ENST00000322213 SIRT7Q9NRC8 400 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF275Q9NSD4 429 aaPredicted RBP6.5□□□□□ -1.37
SMC1A-201ENST00000322213 BLACEA4D250 179 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 DSCR3O14972 297 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 BCKDHBP21953 392 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 ITGB8P26012 769 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 HRH1P35367 487 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 EMP2P54851 167 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 PMPCAQ10713 525 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 SLC14A1Q13336 389 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 FAM160A2Q8N612 972 aaPredicted RBP6.5□□□□□ -1.37
SMC1A-201ENST00000322213 GNPNAT1Q96EK6 184 aaPredicted RBP6.5□□□□□ -1.37
SMC1A-201ENST00000322213 CCDC74BQ96LY2 380 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 CASD1Q96PB1 797 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 CCDC187A0A096LP49 1063 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 HHLA1C9JL84 531 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 FRS3O43559 492 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 AADACP22760 399 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 NPY4RP50391 375 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 UBE2MP61081 183 aaKnown RBP6.49□□□□□ -1.37
SMC1A-201ENST00000322213 TOMM34Q15785 309 aaPredicted RBP6.49□□□□□ -1.37
SMC1A-201ENST00000322213 SSX1Q16384 188 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 FAM58AQ8N1B3 248 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 OR4C16Q8NGL9 310 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 ADAMTS18Q8TE60 1221 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 MSLNLQ96KJ4 702 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 IKZF5Q9H5V7 419 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 SLC17A5Q9NRA2 495 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 SIDT1Q9NXL6 827 aaKnown RBP6.49□□□□□ -1.37
SMC1A-201ENST00000322213 OR6C68A6NDL8 312 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 COCHO43405 550 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF354AO60765 605 aaPredicted RBP6.49□□□□□ -1.37
SMC1A-201ENST00000322213 SULT1A3P0DMM9 295 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 SULT1A4P0DMN0 295 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 HOXA9P31269 272 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF280AP59817 542 aaPredicted RBP6.49□□□□□ -1.37
SMC1A-201ENST00000322213 PABPC1L2AQ5JQF8 200 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF808Q8N4W9 903 aaPredicted RBP6.49□□□□□ -1.37
SMC1A-201ENST00000322213 OR11H7Q8NGC8 314 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 OR52B4Q8NGK2 314 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 OR13C8Q8NGS7 320 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF596Q8TC21 504 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 PRRG4Q9BZD6 226 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 SHARPINQ9H0F6 387 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 PRSS16Q9NQE7 514 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 TNFSF12O43508 249 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 SSSCA1O60232 199 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 LEFTY1O75610 366 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 CNMDO75829 334 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 ADH1BP00325 375 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 CXCL3P19876 107 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 IAH1Q2TAA2 248 aaPredicted RBP6.49□□□□□ -1.37
SMC1A-201ENST00000322213 SFRP5Q5T4F7 317 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 AFMIDQ63HM1 303 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 OR5M10Q6IEU7 315 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 OR2A2Q6IF42 318 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 KIRREL1Q96J84 757 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 NOL4LQ96MY1 436 aaPredicted RBP6.49□□□□□ -1.37
SMC1A-201ENST00000322213 VSTM2BA6NLU5 285 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 CLEC3AO75596 197 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 APODP05090 189 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 GABRR1P24046 479 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 Q6ZRG5 221 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 GDF7Q7Z4P5 450 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 OR5AP2Q8NGF4 316 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 OR13C5Q8NGS8 318 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 ADIPOR1Q96A54 375 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM68Q96MH6 324 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 SLC39A9Q9NUM3 307 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 UQCC1Q9NVA1 299 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 FZD1Q9UP38 647 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF729A6NN14 1252 aaPredicted RBP6.49□□□□□ -1.37
SMC1A-201ENST00000322213 NPIPA2E9PIF3 369 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 NPIPA3F8WFD2 350 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 KLK8O60259 260 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 ADH5P11766 374 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 PRF1P14222 555 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 THBS2P35442 1172 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 RAB28P51157 221 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 PAQR6Q6TCH4 344 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM130Q8N3G9 435 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 OR6N1Q8NGY5 312 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 CSNK1G1Q9HCP0 422 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 IGKV6D-21A0A0A0MT36 114 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF724A8MTY0 619 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 DCTDP32321 178 aa6.49□□□□□ -1.37
SMC1A-201ENST00000322213 PRLHRP49683 370 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms