RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 HSF2Q03933 536 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 HSPB2Q16082 182 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 SLC25A30Q5SVS4 291 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 RIPPLY2Q5TAB7 128 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 LCN1P1Q5VSP4 162 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 ZNF474Q6S9Z5 364 aaPredicted RBP13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 LHFPL3Q86UP9 236 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 CXorf67Q86X51 503 aaPredicted RBP13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 GALNT11Q8NCW6 608 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 OR10H5Q8NGA6 315 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 OR52I1Q8NGK6 324 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 SNX18Q96RF0 628 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 INTS14Q96SY0 518 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 PLSCR4Q9NRQ2 329 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 ASH2LQ9UBL3 628 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 WARS2Q9UGM6 360 aaKnown RBP13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 PSORS1C1Q9UIG5 152 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 KLHDC2Q9Y2U9 406 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 MYO18BQ8IUG5 2567 aa13.53□□□□□ -0.24
PDLIM5-202ENST00000318007 CIB4A0PJX0 185 aa13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 NKX2-6A6NCS4 301 aa13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 C12orf71A8MTZ7 269 aa13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 ZNF99A8MXY4 864 aaPredicted RBP13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 FADS2O95864 444 aaKnown RBP13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 SBK2P0C263 348 aa13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 ZNF823P16415 610 aa13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 OPRM1P35372 400 aa13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 CXCR4P61073 352 aa13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 C10orf128Q5T292 105 aa13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 PLEKHG7Q6ZR37 379 aa13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 Q6ZT83 130 aa13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 SSX6Q7RTT6 188 aa13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 THEM6Q8WUY1 208 aa13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 ZNF416Q9BWM5 594 aa13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 POLE4Q9NR33 117 aa13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 TMEM38BQ9NVV0 291 aa13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 CLEC2DQ9UHP7 191 aa13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 COPS3Q9UNS2 423 aa13.52□□□□□ -0.24
PDLIM5-202ENST00000318007 DVL2O14641 736 aa13.52□□□□□ -0.25
PDLIM5-202ENST00000318007 ZG16O60844 167 aa13.52□□□□□ -0.25
PDLIM5-202ENST00000318007 FAM27E3Q08E93 113 aa13.52□□□□□ -0.25
PDLIM5-202ENST00000318007 SLC35D3Q5M8T2 416 aa13.52□□□□□ -0.25
PDLIM5-202ENST00000318007 RBM48Q5RL73 367 aaKnown RBP13.52□□□□□ -0.25
PDLIM5-202ENST00000318007 TMEM211Q6ICI0 200 aa13.52□□□□□ -0.25
PDLIM5-202ENST00000318007 TIGD4Q8IY51 512 aa13.52□□□□□ -0.25
PDLIM5-202ENST00000318007 SLC22A24Q8N4F4 322 aa13.52□□□□□ -0.25
PDLIM5-202ENST00000318007 FGFBP3Q8TAT2 258 aa13.52□□□□□ -0.25
PDLIM5-202ENST00000318007 FNDC8Q8TC99 324 aa13.52□□□□□ -0.25
PDLIM5-202ENST00000318007 NABP1Q96AH0 204 aa13.52□□□□□ -0.25
PDLIM5-202ENST00000318007 ZFP3Q96NJ6 502 aa13.52□□□□□ -0.25
PDLIM5-202ENST00000318007 AMELYQ99218 206 aa13.52□□□□□ -0.25
PDLIM5-202ENST00000318007 LINC00470Q9BZP3 86 aa13.52□□□□□ -0.25
PDLIM5-202ENST00000318007 NELFAQ9H3P2 528 aa13.52□□□□□ -0.25
PDLIM5-202ENST00000318007 MOKQ9UQ07 419 aa13.52□□□□□ -0.25
PDLIM5-202ENST00000318007 TPRKBQ9Y3C4 175 aa13.52□□□□□ -0.25
PDLIM5-202ENST00000318007 CACNA1CQ13936 2221 aa13.52□□□□□ -0.25
PDLIM5-202ENST00000318007 A0A1W2PQL4 384 aaPredicted RBP13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 ZNF503-AS2A6NEH8 195 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 RER1O15258 196 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 AHCYL1O43865 530 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 TNFAIP8O95379 198 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 HLA-HP01893 362 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 MT-ND2P03891 347 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 LYNP07948 512 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 HTR1AP08908 422 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 CD79BP40259 229 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 MAP2K4P45985 399 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 SLC35A2P78381 396 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 SLC35F2Q8IXU6 374 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 C1QTNF6Q9BXI9 259 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 COQ3Q9NZJ6 369 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 ZNF629Q9UEG4 869 aaPredicted RBP13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 BLOC1S6Q9UL45 172 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 UTP20O75691 2785 aaKnown RBP13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 CENPBD1B2RD01 187 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 CCDC159P0C7I6 412 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 CD79AP11912 226 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 MSR1P21757 451 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 MPGP29372 298 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 SLC15A1P46059 708 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 ETV1P50549 477 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 EIF2B1Q14232 305 aaKnown RBP13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 DCXRQ7Z4W1 244 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 SKA3Q8IX90 412 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 GABRG1Q8N1C3 465 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 OR52N5Q8NH56 324 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 CA5BP1Q8WTZ4 195 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 FBXO17Q96EF6 278 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 LAMP5Q9UJQ1 280 aa13.51□□□□□ -0.25
PDLIM5-202ENST00000318007 DAPL1A0PJW8 107 aa13.5□□□□□ -0.25
PDLIM5-202ENST00000318007 OR6C65A6NJZ3 312 aa13.5□□□□□ -0.25
PDLIM5-202ENST00000318007 PRR32B1ATL7 298 aa13.5□□□□□ -0.25
PDLIM5-202ENST00000318007 RAB36O95755 333 aa13.5□□□□□ -0.25
PDLIM5-202ENST00000318007 CRHP06850 196 aa13.5□□□□□ -0.25
PDLIM5-202ENST00000318007 CD8BP10966 210 aa13.5□□□□□ -0.25
PDLIM5-202ENST00000318007 ENTPD1P49961 510 aa13.5□□□□□ -0.25
PDLIM5-202ENST00000318007 RAB40BQ12829 278 aa13.5□□□□□ -0.25
PDLIM5-202ENST00000318007 OR2G6Q5TZ20 316 aa13.5□□□□□ -0.25
PDLIM5-202ENST00000318007 CFAP77Q6ZQR2 320 aa13.5□□□□□ -0.25
PDLIM5-202ENST00000318007 SLC16A14Q7RTX9 510 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms