RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 NANSQ9NR45 359 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 MED17Q9NVC6 651 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 RPS6KB2Q9UBS0 482 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 TPRP12270 2363 aaKnown RBP11.78□□□□□ -0.52
CPNE1-201ENST00000317677 PCNX2A6NKB5 2137 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 A0A1B0GUH1 482 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 SMIM30A4D0T7 59 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 ALG1L2C9J202 215 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 TEX46H3BTG2 121 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 EEF1E1O43324 174 aaKnown RBP11.78□□□□□ -0.52
CPNE1-201ENST00000317677 HEXAP06865 529 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 FBP1P09467 338 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 HPGDP15428 266 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 CSRP1P21291 193 aaKnown RBP11.78□□□□□ -0.52
CPNE1-201ENST00000317677 CD79BP40259 229 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 NOVA1P51513 510 aaKnown RBP11.78□□□□□ -0.52
CPNE1-201ENST00000317677 CCR4P51679 360 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 PNLIPRP2P54317 469 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 TOMM34Q15785 309 aaPredicted RBP11.78□□□□□ -0.52
CPNE1-201ENST00000317677 GUCA2BQ16661 112 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 GXYLT1Q4G148 440 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 FAM76BQ5HYJ3 339 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 SFRP5Q5T4F7 317 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 HAGHLQ6PII5 290 aaPredicted RBP11.78□□□□□ -0.52
CPNE1-201ENST00000317677 CPOQ8IVL8 374 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 TOMM5Q8N4H5 51 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 NEIL3Q8TAT5 605 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 EDARADDQ8WWZ3 215 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 ZNF649Q9BS31 505 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 PAPOLGQ9BWT3 736 aaKnown RBP11.78□□□□□ -0.52
CPNE1-201ENST00000317677 LAT2Q9GZY6 243 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 MRTO4Q9UKD2 239 aaKnown RBP11.78□□□□□ -0.52
CPNE1-201ENST00000317677 EXOSC1Q9Y3B2 195 aaKnown RBP11.78□□□□□ -0.52
CPNE1-201ENST00000317677 A0A1W2PQD3 144 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 ZC3H12DA2A288 527 aaKnown RBP11.78□□□□□ -0.52
CPNE1-201ENST00000317677 ZNF729A6NN14 1252 aaPredicted RBP11.78□□□□□ -0.52
CPNE1-201ENST00000317677 GMFGO60234 142 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 RCBTB2O95199 551 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 PPP1R3DO95685 299 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 HIST1H2ABP04908 130 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 FOLR2P14207 255 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 MTNR1AP48039 350 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 MTNR1BP49286 362 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 MMP15P51511 669 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 CDH11P55287 796 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 EGR4Q05215 589 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 RAB40BQ12829 278 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 AVPI1Q5T686 147 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 ZNF660Q6AZW8 331 aaPredicted RBP11.78□□□□□ -0.52
CPNE1-201ENST00000317677 HBMQ6B0K9 141 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 WBP2NLQ6ICG8 309 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 B3GLCTQ6Y288 498 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 HIST3H2AQ7L7L0 130 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 CPEB2Q7Z5Q1 589 aaKnown RBP11.78□□□□□ -0.52
CPNE1-201ENST00000317677 SIAH3Q8IW03 269 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 CDK20Q8IZL9 346 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 SVBPQ8N300 66 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 BPIFCQ8NFQ6 507 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 RHBDD1Q8TEB9 315 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 THAP3Q8WTV1 239 aaPredicted RBP11.78□□□□□ -0.52
CPNE1-201ENST00000317677 HIST1H2ACQ93077 130 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 ABHD1Q96SE0 405 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 CRB3Q9BUF7 120 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 NIT2Q9NQR4 276 aa11.78□□□□□ -0.52
CPNE1-201ENST00000317677 GP1BAP07359 652 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 CEACAM1P13688 526 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 PTAFRP25105 342 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 NOS3P29474 1203 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 CLDN6P56747 220 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 LTBQ06643 244 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 LGALS3BPQ08380 585 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 RNF212Q495C1 297 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 NIPAL3Q6P499 406 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 PLBD1Q6P4A8 553 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 GSG1LQ6UXU4 331 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 CXXC5Q7LFL8 322 aaKnown RBP11.77□□□□□ -0.53
CPNE1-201ENST00000317677 MARCH9Q86YJ5 346 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 ARMC10Q8N2F6 343 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 OR4F15Q8NGB8 312 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 OR52L1Q8NGH7 329 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 OR6K3Q8NGY3 331 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 KISS1RQ969F8 398 aaPredicted RBP11.77□□□□□ -0.53
CPNE1-201ENST00000317677 IFT27Q9BW83 186 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 CMC2Q9NRP2 79 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 MIOXQ9UGB7 285 aa11.77□□□□□ -0.53
CPNE1-201ENST00000317677 TRBV11-1A0A0K0K1C0 115 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 SHISA3A0PJX4 238 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 POM121CA8CG34 1229 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 MCIDASD6RGH6 385 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 GSTZ1O43708 216 aaPredicted RBP11.76□□□□□ -0.53
CPNE1-201ENST00000317677 FZD7O75084 574 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 UMODP07911 640 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 LIMS3P0CW19 117 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 LIMS4P0CW20 117 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 SPP1P10451 314 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 CD59P13987 128 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 BMP7P18075 431 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 KCNJ3P48549 501 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 FBXW4P57775 412 aa11.76□□□□□ -0.53
CPNE1-201ENST00000317677 SLC26A5P58743 744 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms