RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 TACR3P29371 465 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 GALNSP34059 522 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 OR2F1Q13607 317 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 PLPP7Q8NBV4 271 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 WDR13Q9H1Z4 485 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 CHD9Q3L8U1 2897 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 A0A0A6YYH2 397 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 A0A1W2PPC1 479 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 A6NJ64 397 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 BGLAPP02818 100 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 HPGDP15428 266 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 ZNF169Q14929 603 aaPredicted RBP17.21■□□□□ 0.35
RTN4-201ENST00000317610 PARM1Q6UWI2 310 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 ZNF761Q86XN6 746 aaPredicted RBP17.21■□□□□ 0.35
RTN4-201ENST00000317610 AVL9Q8NBF6 648 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 OR1J2Q8NGS2 313 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 OR10Z1Q8NGY1 313 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 ASB5Q8WWX0 329 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 FGF14Q92915 247 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 ELF4Q99607 663 aaPredicted RBP17.21■□□□□ 0.35
RTN4-201ENST00000317610 KLHDC3Q9BQ90 382 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 RPP25Q9BUL9 199 aaKnown RBP17.21■□□□□ 0.35
RTN4-201ENST00000317610 SLC6A15Q9H2J7 730 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 PRMT8Q9NR22 394 aaPredicted RBP17.21■□□□□ 0.35
RTN4-201ENST00000317610 GMEB2Q9UKD1 530 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 B9D1Q9UPM9 204 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 PLCL2Q9UPR0 1127 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 DHDHQ9UQ10 334 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 M0QYG6 137 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 ABCD4O14678 606 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 LDLRAD4O15165 306 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 BCL2L11O43521 198 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 UTS2O95399 124 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 KLF8O95600 359 aaPredicted RBP17.21■□□□□ 0.35
RTN4-201ENST00000317610 TNFP01375 233 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 AMY2AP04746 511 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 HTR2CP28335 458 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 DHRS2Q13268 280 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 SLC18B1Q6NT16 456 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 Q6ZSR6 202 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 TMED4Q7Z7H5 227 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 TMEM17Q86X19 198 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 PHYHIPLQ96FC7 376 aa17.21■□□□□ 0.35
RTN4-201ENST00000317610 TCEAL2Q9H3H9 227 aaPredicted RBP17.21■□□□□ 0.35
RTN4-201ENST00000317610 NSA2O95478 260 aaKnown RBP17.2■□□□□ 0.34
RTN4-201ENST00000317610 HSD17B7P56937 341 aa17.2■□□□□ 0.34
RTN4-201ENST00000317610 C11orf87Q6NUJ2 197 aa17.2■□□□□ 0.34
RTN4-201ENST00000317610 CLRN3Q8NCR9 226 aa17.2■□□□□ 0.34
RTN4-201ENST00000317610 OR13C8Q8NGS7 320 aa17.2■□□□□ 0.34
RTN4-201ENST00000317610 KANTRA0A1W2PQU2 76 aa17.2■□□□□ 0.34
RTN4-201ENST00000317610 PRKNO60260 465 aaPredicted RBP17.2■□□□□ 0.34
RTN4-201ENST00000317610 ALOX12BO75342 701 aa17.2■□□□□ 0.34
RTN4-201ENST00000317610 HLA-GP17693 338 aa17.2■□□□□ 0.34
RTN4-201ENST00000317610 RAB3AP20336 220 aa17.2■□□□□ 0.34
RTN4-201ENST00000317610 FAM74A1Q5RGS3 127 aa17.2■□□□□ 0.34
RTN4-201ENST00000317610 SLC35D2Q76EJ3 337 aa17.2■□□□□ 0.34
RTN4-201ENST00000317610 ADGRE4PQ86SQ3 457 aa17.2■□□□□ 0.34
RTN4-201ENST00000317610 CATSPERDQ86XM0 798 aa17.2■□□□□ 0.34
RTN4-201ENST00000317610 C8orf44Q96CB5 159 aa17.2■□□□□ 0.34
RTN4-201ENST00000317610 LRRC46Q96FV0 321 aa17.2■□□□□ 0.34
RTN4-201ENST00000317610 ZNF416Q9BWM5 594 aa17.2■□□□□ 0.34
RTN4-201ENST00000317610 LAT2Q9GZY6 243 aa17.2■□□□□ 0.34
RTN4-201ENST00000317610 S1PR5Q9H228 398 aa17.2■□□□□ 0.34
RTN4-201ENST00000317610 CKLFQ9UBR5 152 aa17.2■□□□□ 0.34
RTN4-201ENST00000317610 TMEM200CA6NKL6 621 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 CNR1P21554 472 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 CD34P28906 385 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 AKT2P31751 481 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 CENPAP49450 140 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 MFGE8Q08431 387 aaPredicted RBP17.19■□□□□ 0.34
RTN4-201ENST00000317610 COL13A1Q5TAT6 717 aaPredicted RBP17.19■□□□□ 0.34
RTN4-201ENST00000317610 ARMC6Q6NXE6 501 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 NDUFAF7Q7L592 441 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 ZNF563Q8TA94 476 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 ZNF519Q8TB69 540 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 PPP1R14AQ96A00 147 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 MRGPRX1Q96LB2 322 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 ZNF587Q96SQ5 575 aaPredicted RBP17.19■□□□□ 0.34
RTN4-201ENST00000317610 MRPL22Q9NWU5 206 aaKnown RBP17.19■□□□□ 0.34
RTN4-201ENST00000317610 SLC2A8Q9NY64 477 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 TAS2R4Q9NYW5 299 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 MRTO4Q9UKD2 239 aaKnown RBP17.19■□□□□ 0.34
RTN4-201ENST00000317610 PRSS37A4D1T9 235 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 ZNF736B4DX44 427 aaPredicted RBP17.19■□□□□ 0.34
RTN4-201ENST00000317610 XKRYO14609 159 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 CYB5AP00167 134 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 CD2P06729 351 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 CELA2BP08218 269 aaPredicted RBP17.19■□□□□ 0.34
RTN4-201ENST00000317610 PBX2P40425 430 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 SLC6A8P48029 635 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 GLYATL3Q5SZD4 288 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 C17orf107Q6ZR85 190 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 ZNF627Q7L945 461 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 NPAS1Q99742 590 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 NKX3-1Q99801 234 aaPredicted RBP17.19■□□□□ 0.34
RTN4-201ENST00000317610 TMEM185BQ9H7F4 350 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 PCDHB16Q9NRJ7 776 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 DZANK1Q9NVP4 752 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 MSRAQ9UJ68 235 aa17.19■□□□□ 0.34
RTN4-201ENST00000317610 MRPS18BQ9Y676 258 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms