RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 POM121Q96HA1 1249 aa4.16□□□□□ -1.74
CNOT1-201ENST00000317147 FBXW2Q9UKT8 454 aa4.16□□□□□ -1.74
CNOT1-201ENST00000317147 ZNF726A6NNF4 738 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 ZNF705FA8MVS1 300 aaPredicted RBP4.15□□□□□ -1.74
CNOT1-201ENST00000317147 RNASEK-C17orf49H0YIS7 233 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 ZNF207O43670 478 aaKnown RBP4.15□□□□□ -1.74
CNOT1-201ENST00000317147 ZNF705DP0CH99 300 aaPredicted RBP4.15□□□□□ -1.74
CNOT1-201ENST00000317147 ZNF705BP0CI00 300 aaPredicted RBP4.15□□□□□ -1.74
CNOT1-201ENST00000317147 STAG3L3P0CL85 134 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 LAG3P18627 525 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 PRDX3P30048 256 aaKnown RBP4.15□□□□□ -1.74
CNOT1-201ENST00000317147 SDHAP31040 664 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 GDF5P43026 501 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 ECH1Q13011 328 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 EIF2B1Q14232 305 aaKnown RBP4.15□□□□□ -1.74
CNOT1-201ENST00000317147 ETFDHQ16134 617 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 SAPCD1Q5SSQ6 148 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 COL5A1-AS1Q5SY13 56 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 KIAA0895LQ68EN5 471 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 ZNF600Q6ZNG1 722 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 LAS2Q8IYD9 372 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 CLDN19Q8N6F1 224 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 EXD3Q8N9H8 876 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 OR56B2PQ8NGI1 322 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 ATOH1Q92858 354 aaPredicted RBP4.15□□□□□ -1.74
CNOT1-201ENST00000317147 CDS1Q92903 461 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 BSCL2Q96G97 398 aaPredicted RBP4.15□□□□□ -1.74
CNOT1-201ENST00000317147 MOGAT1Q96PD6 335 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 VCX2Q9H322 139 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 LIN7CQ9NUP9 197 aaKnown RBP4.15□□□□□ -1.74
CNOT1-201ENST00000317147 USP22Q9UPT9 525 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 OR1A2Q9Y585 309 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 CPAMD8Q8IZJ3 1885 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 CCL15-CCL14A0A0B4J2E2 113 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 ZNF593O00488 134 aaPredicted RBP4.15□□□□□ -1.74
CNOT1-201ENST00000317147 FZD6O60353 706 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 SCGB1D2O95969 90 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 IGHA1P01876 353 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 GCSHP23434 173 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 ERVS71-1P61550 626 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 CCL15Q16663 113 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 SLC29A4Q7RTT9 530 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 LIMS2Q7Z4I7 341 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 TP53I13Q8NBR0 393 aaPredicted RBP4.15□□□□□ -1.74
CNOT1-201ENST00000317147 OR51A2Q8NGJ7 313 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 OR4K15Q8NH41 348 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 TMEM204Q9BSN7 226 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 OR51I2Q9H344 312 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 C2orf42Q9NWW7 574 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 SIDT1Q9NXL6 827 aaKnown RBP4.15□□□□□ -1.74
CNOT1-201ENST00000317147 DCHS2Q6V1P9 2916 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 MCRIP1C9JLW8 97 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 PIP5K1CO60331 668 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 SLCO2B1O94956 709 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 PCDH8O95206 1070 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 H2BFMP0C1H6 154 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 TFPIP10646 304 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 ACVR1BP36896 505 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 CCR6P51684 374 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 ZNF792Q3KQV3 632 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 EXOSC6Q5RKV6 272 aaKnown RBP4.15□□□□□ -1.74
CNOT1-201ENST00000317147 OR2T2Q6IF00 324 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 OR1S2Q8NGQ3 325 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 ASB5Q8WWX0 329 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 SCLYQ96I15 445 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 VAMP8Q9BV40 100 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 C19orf25Q9UFG5 118 aaPredicted RBP4.15□□□□□ -1.74
CNOT1-201ENST00000317147 OR52A1Q9UKL2 312 aa4.15□□□□□ -1.74
CNOT1-201ENST00000317147 A0A0G2JLL6 359 aaPredicted RBP4.15□□□□□ -1.75
CNOT1-201ENST00000317147 MANSC4A6NHS7 340 aaPredicted RBP4.15□□□□□ -1.75
CNOT1-201ENST00000317147 HEPACAM2A8MVW5 462 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 PFKMP08237 780 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 PGA3P0DJD8 388 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 DDTP30046 118 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 ADH7P40394 386 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 GPR4P46093 362 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 ZNF84P51523 738 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 SGSHP51688 502 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 PCBD1P61457 104 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 RACK1P63244 317 aaKnown RBP4.15□□□□□ -1.75
CNOT1-201ENST00000317147 FABP9Q0Z7S8 132 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 LRRC37A5PQ49AS3 106 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 SOWAHCQ53LP3 525 aaPredicted RBP4.15□□□□□ -1.75
CNOT1-201ENST00000317147 ZNF789Q5FWF6 425 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 AFMIDQ63HM1 303 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 TMPPEQ6ZT21 453 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 PRRT2Q7Z6L0 340 aaPredicted RBP4.15□□□□□ -1.75
CNOT1-201ENST00000317147 SPNS2Q8IVW8 549 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 CCDC116Q8IYX3 515 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 OR5AK3PQ8NH89 298 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 MITD1Q8WV92 249 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 TMEM106AQ96A25 262 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 SENP5Q96HI0 755 aaPredicted RBP4.15□□□□□ -1.75
CNOT1-201ENST00000317147 KIRREL1Q96J84 757 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 TMEM59Q9BXS4 323 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.15□□□□□ -1.75
CNOT1-201ENST00000317147 GPR61Q9BZJ8 451 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 GHITMQ9H3K2 345 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 ZNF286AQ9HBT8 521 aa4.15□□□□□ -1.75
CNOT1-201ENST00000317147 MANBALQ9NQG1 85 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms