RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 SLC6A19Q695T7 634 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 SLC25A42Q86VD7 318 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 SAMD14Q8IZD0 417 aaPredicted RBP6.95□□□□□ -1.3
CNOT4-201ENST00000315544 RNF133Q8WVZ7 376 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 C1GALT1C1Q96EU7 318 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 TSSK2Q96PF2 358 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 CPNE7Q9UBL6 633 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 ERVK-19Q9WJR5 959 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 MSRB2Q9Y3D2 182 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 IGHV5-51A0A0C4DH38 117 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 TMEM72A0PK05 275 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 ARHGEF9O43307 516 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 EEF1E1O43324 174 aaKnown RBP6.94□□□□□ -1.3
CNOT4-201ENST00000315544 ZNF432O94892 652 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 KDM4BO94953 1096 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 F13BP05160 661 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 MAT2AP31153 395 aaKnown RBP6.94□□□□□ -1.3
CNOT4-201ENST00000315544 FNDC3BQ53EP0 1204 aaKnown RBP6.94□□□□□ -1.3
CNOT4-201ENST00000315544 TMEM268Q5VZI3 342 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 OR5M10Q6IEU7 315 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 KCNRGQ8N5I3 272 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 SAMD12Q8N8I0 201 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 OR52B4Q8NGK2 314 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 OR10Z1Q8NGY1 313 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 OR51A7Q8NH64 312 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 DCBLD2Q96PD2 775 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 FGF23Q9GZV9 251 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-201ENST00000315544 COA4Q9NYJ1 87 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 R4GN57 208 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 H3BN98 237 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 NDUFB2O95178 105 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 RCBTB2O95199 551 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 IFI30P13284 250 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 HLA-DOBP13765 273 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 NTSP30990 170 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 VEGFCP49767 419 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 GSK3AP49840 483 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 MMP16P51512 607 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 MRPS10P82664 201 aaKnown RBP6.94□□□□□ -1.3
CNOT4-201ENST00000315544 FOXK1P85037 733 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 TMEM42Q69YG0 159 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 HOGA1Q86XE5 327 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 ZNF561Q8N587 486 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 SLC38A9Q8NBW4 561 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 SLC30A7Q8NEW0 376 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 TSTD1Q8NFU3 115 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 LIN37Q96GY3 246 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-201ENST00000315544 CNN2Q99439 309 aaKnown RBP6.94□□□□□ -1.3
CNOT4-201ENST00000315544 NDC1Q9BTX1 674 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 GSX2Q9BZM3 304 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 CLCA2Q9UQC9 943 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 V9GYS6 101 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 ALOX12BO75342 701 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 CD5P06127 495 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 CD14P08571 375 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 FOLR2P14207 255 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 PVRP15151 417 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 CMPK1P30085 196 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 CCKBRP32239 447 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 SOAT1P35610 550 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 BUD31P41223 144 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-201ENST00000315544 SRSF3P84103 164 aaKnown RBP6.94□□□□□ -1.3
CNOT4-201ENST00000315544 FOXF1Q12946 379 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 MRPL28Q13084 256 aaKnown RBP6.94□□□□□ -1.3
CNOT4-201ENST00000315544 C1DQ13901 141 aaKnown RBP6.94□□□□□ -1.3
CNOT4-201ENST00000315544 DEFB134Q4QY38 66 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 CCDC92Q53HC0 331 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-201ENST00000315544 LYSMD4Q5XG99 296 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 FAAP20Q6NZ36 180 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 C19orf47Q8N9M1 422 aaKnown RBP6.94□□□□□ -1.3
CNOT4-201ENST00000315544 CYB561A3Q8NBI2 242 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 OR4D6Q8NGJ1 314 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 OR5M1Q8NGP8 315 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 ALG12Q9BV10 488 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 SLC26A1Q9H2B4 701 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 ASCL3Q9NQ33 180 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 SUSD2Q9UGT4 822 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 FBXL2Q9UKC9 423 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 OSGIN2Q9Y236 505 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 PI4KAP42356 2102 aa6.94□□□□□ -1.3
CNOT4-201ENST00000315544 A0A1B0GWJ7 208 aa6.93□□□□□ -1.3
CNOT4-201ENST00000315544 FLRT2O43155 660 aa6.93□□□□□ -1.3
CNOT4-201ENST00000315544 EFSO43281 561 aa6.93□□□□□ -1.3
CNOT4-201ENST00000315544 TTRP02766 147 aa6.93□□□□□ -1.3
CNOT4-201ENST00000315544 CTLA4P16410 223 aa6.93□□□□□ -1.3
CNOT4-201ENST00000315544 ARRB1P49407 418 aaPredicted RBP6.93□□□□□ -1.3
CNOT4-201ENST00000315544 AFF3P51826 1226 aaKnown RBP6.93□□□□□ -1.3
CNOT4-201ENST00000315544 B3GALT5-AS1P59052 145 aa6.93□□□□□ -1.3
CNOT4-201ENST00000315544 EIF4EBP1Q13541 118 aaPredicted RBP6.93□□□□□ -1.3
CNOT4-201ENST00000315544 SLC17A1Q14916 467 aa6.93□□□□□ -1.3
CNOT4-201ENST00000315544 RSPO4Q2I0M5 234 aaPredicted RBP6.93□□□□□ -1.3
CNOT4-201ENST00000315544 PYDC2Q56P42 97 aa6.93□□□□□ -1.3
CNOT4-201ENST00000315544 TMEM185AQ8NFB2 350 aa6.93□□□□□ -1.3
CNOT4-201ENST00000315544 OR5M8Q8NGP6 311 aa6.93□□□□□ -1.3
CNOT4-201ENST00000315544 TM2D1Q9BX74 207 aa6.93□□□□□ -1.3
CNOT4-201ENST00000315544 ACTR6Q9GZN1 396 aa6.93□□□□□ -1.3
CNOT4-201ENST00000315544 TCFL5Q9UL49 500 aa6.93□□□□□ -1.3
CNOT4-201ENST00000315544 B9D1Q9UPM9 204 aa6.93□□□□□ -1.3
CNOT4-201ENST00000315544 ANK3Q12955 4377 aaKnown RBP6.93□□□□□ -1.3
CNOT4-201ENST00000315544 OR2AT4A6NND4 320 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms