RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 PLCXD1Q9NUJ7 323 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 BAIAP2Q9UQB8 552 aa15.98■□□□□ 0.15
HMGA1-201ENST00000311487 FASNP49327 2511 aaKnown RBP15.97■□□□□ 0.15
HMGA1-201ENST00000311487 TRIM64BA6NI03 449 aa15.97■□□□□ 0.15
HMGA1-201ENST00000311487 MSTNO14793 375 aa15.97■□□□□ 0.15
HMGA1-201ENST00000311487 IL18BPO95998 194 aa15.97■□□□□ 0.15
HMGA1-201ENST00000311487 HMGN1P05114 100 aa15.97■□□□□ 0.15
HMGA1-201ENST00000311487 SCG5P05408 212 aa15.97■□□□□ 0.15
HMGA1-201ENST00000311487 MAP2K4P45985 399 aa15.97■□□□□ 0.15
HMGA1-201ENST00000311487 TUBA1BP68363 451 aa15.97■□□□□ 0.15
HMGA1-201ENST00000311487 ARF1P84077 181 aaKnown RBP15.97■□□□□ 0.15
HMGA1-201ENST00000311487 HIKESHIQ53FT3 197 aa15.97■□□□□ 0.15
HMGA1-201ENST00000311487 MTFR2Q6P444 385 aa15.97■□□□□ 0.15
HMGA1-201ENST00000311487 C22orf34Q6ZV56 151 aa15.97■□□□□ 0.15
HMGA1-201ENST00000311487 TUBA1AQ71U36 451 aa15.97■□□□□ 0.15
HMGA1-201ENST00000311487 LRRC18Q8N456 261 aa15.97■□□□□ 0.15
HMGA1-201ENST00000311487 SMAP2Q8WU79 429 aaPredicted RBP15.97■□□□□ 0.15
HMGA1-201ENST00000311487 IMPAD1Q9NX62 359 aa15.97■□□□□ 0.15
HMGA1-201ENST00000311487 DNAJC27Q9NZQ0 273 aa15.97■□□□□ 0.15
HMGA1-201ENST00000311487 VSX1Q9NZR4 365 aaPredicted RBP15.97■□□□□ 0.15
HMGA1-201ENST00000311487 MALT1Q9UDY8 824 aa15.97■□□□□ 0.15
HMGA1-201ENST00000311487 CACNA1CQ13936 2221 aa15.97■□□□□ 0.15
HMGA1-201ENST00000311487 ZNF99A8MXY4 864 aaPredicted RBP15.96■□□□□ 0.15
HMGA1-201ENST00000311487 IFNGP01579 166 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 PATE4P0C8F1 98 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 TMBIM6P55061 237 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 CDC42P60953 191 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 STK11Q15831 433 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 THEM4Q5T1C6 240 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 BEND4Q6ZU67 534 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 AHSA2Q719I0 299 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 PRSS48Q7RTY5 328 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 ADCK1Q86TW2 530 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 PROKR2Q8NFJ6 384 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 OR6K6Q8NGW6 343 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 LRR1Q96L50 414 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 TEX12Q9BXU0 123 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 PIGMQ9H3S5 423 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 KCNJ16Q9NPI9 418 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 JKAMPQ9P055 326 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 PSORS1C1Q9UIG5 152 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 KLHL21Q9UJP4 597 aa15.96■□□□□ 0.15
HMGA1-201ENST00000311487 TVP23AA6NH52 213 aa15.96■□□□□ 0.14
HMGA1-201ENST00000311487 PRR23D1E9PI22 279 aaPredicted RBP15.96■□□□□ 0.14
HMGA1-201ENST00000311487 DHHO43323 396 aa15.96■□□□□ 0.14
HMGA1-201ENST00000311487 PRR23D2P0DMB1 279 aaPredicted RBP15.96■□□□□ 0.14
HMGA1-201ENST00000311487 RPS27P42677 84 aaKnown RBP15.96■□□□□ 0.14
HMGA1-201ENST00000311487 SGCAQ16586 387 aa15.96■□□□□ 0.14
HMGA1-201ENST00000311487 FAM205BPQ63HN1 556 aa15.96■□□□□ 0.14
HMGA1-201ENST00000311487 STAC2Q6ZMT1 411 aa15.96■□□□□ 0.14
HMGA1-201ENST00000311487 CXXC5Q7LFL8 322 aaKnown RBP15.96■□□□□ 0.14
HMGA1-201ENST00000311487 HDDC2Q7Z4H3 204 aa15.96■□□□□ 0.14
HMGA1-201ENST00000311487 ASB5Q8WWX0 329 aa15.96■□□□□ 0.14
HMGA1-201ENST00000311487 B9D1Q9UPM9 204 aa15.96■□□□□ 0.14
HMGA1-201ENST00000311487 CIB4A0PJX0 185 aa15.95■□□□□ 0.14
HMGA1-201ENST00000311487 A1L4Q6 167 aa15.95■□□□□ 0.14
HMGA1-201ENST00000311487 NOL3O60936 208 aaKnown RBP15.95■□□□□ 0.14
HMGA1-201ENST00000311487 FADS2O95864 444 aaKnown RBP15.95■□□□□ 0.14
HMGA1-201ENST00000311487 HLA-DQA2P01906 255 aa15.95■□□□□ 0.14
HMGA1-201ENST00000311487 SPI1P17947 270 aa15.95■□□□□ 0.14
HMGA1-201ENST00000311487 RPS7P62081 194 aaKnown RBP15.95■□□□□ 0.14
HMGA1-201ENST00000311487 SLC25A47Q6Q0C1 308 aa15.95■□□□□ 0.14
HMGA1-201ENST00000311487 KLHL24Q6TFL4 600 aa15.95■□□□□ 0.14
HMGA1-201ENST00000311487 SVOPQ8N4V2 548 aa15.95■□□□□ 0.14
HMGA1-201ENST00000311487 ZNF511Q8NB15 262 aa15.95■□□□□ 0.14
HMGA1-201ENST00000311487 ZC3HAV1LQ96H79 300 aaKnown RBP15.95■□□□□ 0.14
HMGA1-201ENST00000311487 ALG12Q9BV10 488 aa15.95■□□□□ 0.14
HMGA1-201ENST00000311487 C1QTNF6Q9BXI9 259 aa15.95■□□□□ 0.14
HMGA1-201ENST00000311487 AMBNQ9NP70 447 aa15.95■□□□□ 0.14
HMGA1-201ENST00000311487 EMC7Q9NPA0 242 aa15.95■□□□□ 0.14
HMGA1-201ENST00000311487 B3GAT2Q9NPZ5 323 aa15.95■□□□□ 0.14
HMGA1-201ENST00000311487 FKBP14Q9NWM8 211 aa15.95■□□□□ 0.14
HMGA1-201ENST00000311487 UGT2A1Q9Y4X1 527 aa15.95■□□□□ 0.14
HMGA1-201ENST00000311487 APOL3O95236 402 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 CLDN14O95500 239 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 EFNB1P98172 346 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 ZNF433Q8N7K0 673 aaPredicted RBP15.94■□□□□ 0.14
HMGA1-201ENST00000311487 TMEM163Q8TC26 289 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 RORBQ92753 470 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 ZMYND19Q96E35 227 aaPredicted RBP15.94■□□□□ 0.14
HMGA1-201ENST00000311487 COPS4Q9BT78 406 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 DCUN1D5Q9BTE7 237 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 FUNDC2Q9BWH2 189 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 LINC00470Q9BZP3 86 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 ACOT13Q9NPJ3 140 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 WARS2Q9UGM6 360 aaKnown RBP15.94■□□□□ 0.14
HMGA1-201ENST00000311487 A0A1W2PPW3 197 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 C19orf84I3L1E1 186 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 MPGP29372 298 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 CAPZA2P47755 286 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 NUDT6P53370 316 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 MVKQ03426 396 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 SLC25A35Q3KQZ1 300 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 SFRP5Q5T4F7 317 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 ZNF813Q6ZN06 617 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 ZNF808Q8N4W9 903 aaPredicted RBP15.94■□□□□ 0.14
HMGA1-201ENST00000311487 OR52N5Q8NH56 324 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 RAB2BQ8WUD1 216 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 GGHQ92820 318 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 KISS1RQ969F8 398 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms