RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 NDUFB11Q9NX14 153 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 B3GALT5Q9Y2C3 310 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 URGCP-MRPS24S4R325 110 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 TAF1P21675 1872 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 LTBP3Q9NS15 1303 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 CD1EP15812 388 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 MAP2K6P52564 334 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 AGFG1P52594 562 aaKnown RBP14.28□□□□□ -0.12
HCFC1-201ENST00000310441 HSF5Q4G112 596 aaPredicted RBP14.28□□□□□ -0.12
HCFC1-201ENST00000310441 CDH26Q8IXH8 852 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 S1PR3Q99500 378 aa14.28□□□□□ -0.12
HCFC1-201ENST00000310441 DOCK5Q9H7D0 1870 aa14.27□□□□□ -0.12
HCFC1-201ENST00000310441 GALR2O43603 387 aaPredicted RBP14.27□□□□□ -0.12
HCFC1-201ENST00000310441 CTSAP10619 480 aa14.27□□□□□ -0.12
HCFC1-201ENST00000310441 EXOSC7Q15024 291 aaKnown RBP14.27□□□□□ -0.12
HCFC1-201ENST00000310441 CTU2Q2VPK5 515 aaKnown RBP14.27□□□□□ -0.12
HCFC1-201ENST00000310441 CABLES2Q9BTV7 478 aa14.27□□□□□ -0.12
HCFC1-201ENST00000310441 ZNF230Q9UIE0 474 aaPredicted RBP14.27□□□□□ -0.12
HCFC1-201ENST00000310441 A6NL46 340 aa14.27□□□□□ -0.12
HCFC1-201ENST00000310441 M0QZ24 198 aa14.27□□□□□ -0.12
HCFC1-201ENST00000310441 OR10A3P58181 314 aa14.27□□□□□ -0.12
HCFC1-201ENST00000310441 PRDX1Q06830 199 aaKnown RBP14.27□□□□□ -0.12
HCFC1-201ENST00000310441 PDZK1IP1Q13113 114 aa14.27□□□□□ -0.12
HCFC1-201ENST00000310441 FBXW5Q969U6 566 aa14.27□□□□□ -0.12
HCFC1-201ENST00000310441 IL17CQ9P0M4 197 aa14.27□□□□□ -0.12
HCFC1-201ENST00000310441 OR2M5A3KFT3 312 aa14.27□□□□□ -0.12
HCFC1-201ENST00000310441 ARR3P36575 388 aa14.27□□□□□ -0.12
HCFC1-201ENST00000310441 BIDP55957 195 aa14.27□□□□□ -0.12
HCFC1-201ENST00000310441 COL13A1Q5TAT6 717 aaPredicted RBP14.27□□□□□ -0.12
HCFC1-201ENST00000310441 TXLNGYQ9BZA5 131 aa14.27□□□□□ -0.12
HCFC1-201ENST00000310441 A0A0A6YYC8 382 aaPredicted RBP14.27□□□□□ -0.13
HCFC1-201ENST00000310441 I3L1I5 382 aaPredicted RBP14.27□□□□□ -0.13
HCFC1-201ENST00000310441 PDGFAP04085 211 aa14.27□□□□□ -0.13
HCFC1-201ENST00000310441 RAB6CQ9H0N0 254 aa14.27□□□□□ -0.13
HCFC1-201ENST00000310441 TAAR2Q9P1P5 351 aa14.27□□□□□ -0.13
HCFC1-201ENST00000310441 ZNF724A8MTY0 619 aa14.27□□□□□ -0.13
HCFC1-201ENST00000310441 VAMP5O95183 116 aa14.27□□□□□ -0.13
HCFC1-201ENST00000310441 ACSM4P0C7M7 580 aa14.27□□□□□ -0.13
HCFC1-201ENST00000310441 MRPL38Q96DV4 380 aaKnown RBP14.27□□□□□ -0.13
HCFC1-201ENST00000310441 SRRQ9GZT4 340 aa14.27□□□□□ -0.13
HCFC1-201ENST00000310441 CD207Q9UJ71 328 aa14.27□□□□□ -0.13
HCFC1-201ENST00000310441 EPHA5P54756 1037 aa14.27□□□□□ -0.13
HCFC1-201ENST00000310441 ERVFC1P60507 584 aa14.27□□□□□ -0.13
HCFC1-201ENST00000310441 CTDSP1Q9GZU7 261 aa14.27□□□□□ -0.13
HCFC1-201ENST00000310441 PRICKLE3O43900 615 aaPredicted RBP14.27□□□□□ -0.13
HCFC1-201ENST00000310441 GASTP01350 101 aa14.27□□□□□ -0.13
HCFC1-201ENST00000310441 EDN1P05305 212 aa14.27□□□□□ -0.13
HCFC1-201ENST00000310441 TPPP2P59282 170 aa14.27□□□□□ -0.13
HCFC1-201ENST00000310441 UQCC3Q6UW78 93 aa14.27□□□□□ -0.13
HCFC1-201ENST00000310441 FBXO34Q9NWN3 711 aa14.27□□□□□ -0.13
HCFC1-201ENST00000310441 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.26□□□□□ -0.13
HCFC1-201ENST00000310441 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.26□□□□□ -0.13
HCFC1-201ENST00000310441 ZNF207O43670 478 aaKnown RBP14.26□□□□□ -0.13
HCFC1-201ENST00000310441 ADRA1AP35348 466 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 SLC29A1Q99808 456 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 SCRG1O75711 98 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 APOBEC1P41238 236 aaKnown RBP14.26□□□□□ -0.13
HCFC1-201ENST00000310441 ZNF542PQ5EBM4 170 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 MAMDC4Q6UXC1 1216 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 DND1Q8IYX4 353 aaKnown RBP14.26□□□□□ -0.13
HCFC1-201ENST00000310441 UBTD2Q8WUN7 234 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 MMP7P09237 267 aaPredicted RBP14.26□□□□□ -0.13
HCFC1-201ENST00000310441 COX5AP20674 150 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 UBE2IP63279 158 aaKnown RBP14.26□□□□□ -0.13
HCFC1-201ENST00000310441 THEM4Q5T1C6 240 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 VRK2Q86Y07 508 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 ZNF573Q86YE8 665 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 HSD17B11Q8NBQ5 300 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 PINX1Q96BK5 328 aaKnown RBP14.26□□□□□ -0.13
HCFC1-201ENST00000310441 PRSS16Q9NQE7 514 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 HSD17B6O14756 317 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 OR5H8P0DN80 308 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 VHLLQ6RSH7 139 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 OR13C9Q8NGT0 318 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 CXorf58Q96LI9 332 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 GAREM1Q9H706 876 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 MRPS2Q9Y399 296 aaKnown RBP14.26□□□□□ -0.13
HCFC1-201ENST00000310441 RAB6CQ53S08 254 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 OR13F1Q8NGS4 319 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 FAM53CQ9NYF3 392 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 TERTO14746 1132 aaKnown RBP14.26□□□□□ -0.13
HCFC1-201ENST00000310441 FRS3O43559 492 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 F13BP05160 661 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 TMEM11P17152 192 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 ELAVL4P26378 380 aaKnown RBP14.26□□□□□ -0.13
HCFC1-201ENST00000310441 HLA-FP30511 346 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 HNRNPA3P51991 378 aaKnown RBP14.26□□□□□ -0.13
HCFC1-201ENST00000310441 FAM189BP81408 668 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 OR5I1Q13606 314 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 ARL2-SNX15V9GYD0 113 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 ICMTO60725 284 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 UTS2O95399 124 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 SLC6A11P48066 632 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 L3MBTL4Q8NA19 623 aa14.26□□□□□ -0.13
HCFC1-201ENST00000310441 ADAM5Q6NVV9 412 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 TRABD2BA6NFA1 517 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 SSSCA1O60232 199 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 C1QBP02746 253 aa14.25□□□□□ -0.13
HCFC1-201ENST00000310441 SNRPBP14678 240 aaKnown RBP14.25□□□□□ -0.13
HCFC1-201ENST00000310441 EDDM3BP56851 147 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms