RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 OR51Q1Q8NH59 317 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 NR4A3Q92570 626 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 ATOH1Q92858 354 aaPredicted RBP11.51□□□□□ -0.57
RETREG3-201ENST00000309428 SMIM19Q96E16 107 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 C14orf79Q96F83 325 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 RGCCQ9H4X1 137 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 ZNF230Q9UIE0 474 aaPredicted RBP11.51□□□□□ -0.57
RETREG3-201ENST00000309428 PCDHGA5Q9Y5G8 931 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 FANCMQ8IYD8 2048 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 MED19A0JLT2 244 aaPredicted RBP11.51□□□□□ -0.57
RETREG3-201ENST00000309428 OIP5O43482 229 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 GALR3O60755 368 aaPredicted RBP11.51□□□□□ -0.57
RETREG3-201ENST00000309428 IGKV1D-16P01601 117 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 ZNF273Q14593 569 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 EBPQ15125 230 aaKnown RBP11.51□□□□□ -0.57
RETREG3-201ENST00000309428 MEP1BQ16820 701 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 PDZD11Q5EBL8 140 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 KLHL24Q6TFL4 600 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 GPAT4Q86UL3 456 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 CA13Q8N1Q1 262 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 OR4D10Q8NGI6 311 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 GIMAP5Q96F15 307 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 TINAGL1Q9GZM7 467 aaPredicted RBP11.51□□□□□ -0.57
RETREG3-201ENST00000309428 C7orf66A4D0T2 115 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 NGFRP08138 427 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 CSF1P09603 554 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 S1PR1P21453 382 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 PRKAR1BP31321 381 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 KCNJ3P48549 501 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 ZNF136P52737 540 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 ACTBP60709 375 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 ACTG1P63261 375 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 TMEM255AQ5JRV8 349 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 NKAPLQ5M9Q1 402 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 C19orf48Q6RUI8 117 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 GLDNQ6ZMI3 551 aaPredicted RBP11.51□□□□□ -0.57
RETREG3-201ENST00000309428 COX15Q7KZN9 410 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 RAB11FIP2Q7L804 512 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 SP7Q8TDD2 431 aaPredicted RBP11.51□□□□□ -0.57
RETREG3-201ENST00000309428 TCEAL3Q969E4 200 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 BCL2L10Q9HD36 194 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 TAS2R8Q9NYW2 309 aa11.51□□□□□ -0.57
RETREG3-201ENST00000309428 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.5□□□□□ -0.57
RETREG3-201ENST00000309428 A0A1B0GUH1 482 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.5□□□□□ -0.57
RETREG3-201ENST00000309428 HCKP08631 526 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 RGS19P49795 217 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 GPR85P60893 370 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 Q499Y3 187 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 MARCH3Q86UD3 253 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 CDH26Q8IXH8 852 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 OR13C3Q8NGS6 347 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 OR10Z1Q8NGY1 313 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 MFSD8Q8NHS3 518 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 RNASE11Q8TAA1 199 aaKnown RBP11.5□□□□□ -0.57
RETREG3-201ENST00000309428 C15orf40Q8WUR7 153 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 ZNRF4Q8WWF5 429 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 TTC9Q92623 222 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 ISYNA1Q9NPH2 558 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 PCDHB10Q9UN67 800 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 C19orf53Q9UNZ5 99 aaPredicted RBP11.5□□□□□ -0.57
RETREG3-201ENST00000309428 LSM5Q9Y4Y9 91 aaKnown RBP11.5□□□□□ -0.57
RETREG3-201ENST00000309428 PHF3Q92576 2039 aaKnown RBP11.5□□□□□ -0.57
RETREG3-201ENST00000309428 SLC16A7O60669 478 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 MED6O75586 246 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 LDOC1O95751 146 aaPredicted RBP11.5□□□□□ -0.57
RETREG3-201ENST00000309428 MPIG6BO95866 241 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 F10P00742 488 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 TRA2BP62995 288 aaKnown RBP11.5□□□□□ -0.57
RETREG3-201ENST00000309428 SNTB1Q13884 538 aaKnown RBP11.5□□□□□ -0.57
RETREG3-201ENST00000309428 SLC36A2Q495M3 483 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 OR5D18Q8NGL1 313 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 OR1S2Q8NGQ3 325 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 PPP1R1CQ8WVI7 109 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 C10orf90Q96M02 699 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 ST6GALNAC5Q9BVH7 336 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 NXF5Q9H1B4 397 aaKnown RBP11.5□□□□□ -0.57
RETREG3-201ENST00000309428 OR10A5Q9H207 317 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 DZANK1Q9NVP4 752 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 TAS2R5Q9NYW4 299 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 FREM2Q5SZK8 3169 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 DSPPQ9NZW4 1301 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 IGHV5-51A0A0C4DH38 117 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 ZNF98A6NK75 572 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 PRSS44E7EML9 344 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 RAB40ALP0C0E4 278 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 CD80P33681 288 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 ETFDHQ16134 617 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 C19orf47Q8N9M1 422 aaKnown RBP11.5□□□□□ -0.57
RETREG3-201ENST00000309428 OR11G2Q8NGC1 345 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 OR1J4Q8NGS1 313 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 BAHD1Q8TBE0 780 aaPredicted RBP11.5□□□□□ -0.57
RETREG3-201ENST00000309428 SFXN5Q8TD22 340 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 RAB40AQ8WXH6 277 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 FOXRED1Q96CU9 486 aaPredicted RBP11.5□□□□□ -0.57
RETREG3-201ENST00000309428 MOGAT1Q96PD6 335 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 INTS14Q96SY0 518 aa11.5□□□□□ -0.57
RETREG3-201ENST00000309428 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.5□□□□□ -0.57
RETREG3-201ENST00000309428 PARPBPQ9NWS1 579 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms