RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 TIMM10BQ9Y5J6 103 aa17.21■□□□□ 0.35
VEGFB-201ENST00000309422 CSMD1Q96PZ7 3565 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 IGKV1D-43A0A0B4J1Z2 117 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 ERCC1P07992 297 aaPredicted RBP17.2■□□□□ 0.34
VEGFB-201ENST00000309422 SOD3P08294 240 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 DANCRP0C864 163 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 PATE4P0C8F1 98 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 HIST1H1CP16403 213 aaKnown RBP17.2■□□□□ 0.34
VEGFB-201ENST00000309422 CTLA4P16410 223 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 ZNF14P17017 642 aaPredicted RBP17.2■□□□□ 0.34
VEGFB-201ENST00000309422 GDI2P50395 445 aaKnown RBP17.2■□□□□ 0.34
VEGFB-201ENST00000309422 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.2■□□□□ 0.34
VEGFB-201ENST00000309422 SHQ1Q6PI26 577 aaKnown RBP17.2■□□□□ 0.34
VEGFB-201ENST00000309422 B3GLCTQ6Y288 498 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 ASRGL1Q7L266 308 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 SYT9Q86SS6 491 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 DTX2Q86UW9 622 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 OR52E2Q8NGJ4 325 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 NRBF2Q96F24 287 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 MS4A3Q96HJ5 214 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 NMNAT3Q96T66 252 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 TRAF4Q9BUZ4 470 aaPredicted RBP17.2■□□□□ 0.34
VEGFB-201ENST00000309422 GSX2Q9BZM3 304 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 ZNF442Q9H7R0 627 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 RPRD1BQ9NQG5 326 aaKnown RBP17.2■□□□□ 0.34
VEGFB-201ENST00000309422 ZNF224Q9NZL3 707 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 EIF3KQ9UBQ5 218 aaKnown RBP17.2■□□□□ 0.34
VEGFB-201ENST00000309422 NDRG4Q9ULP0 352 aaKnown RBP17.2■□□□□ 0.34
VEGFB-201ENST00000309422 TEX15Q9BXT5 2789 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 CSMD2Q7Z408 3487 aa17.2■□□□□ 0.34
VEGFB-201ENST00000309422 ZNF32P17041 273 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 PAICSP22234 425 aaKnown RBP17.19■□□□□ 0.34
VEGFB-201ENST00000309422 CCNOP22674 350 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 POU1F1P28069 291 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 CALCRP30988 508 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 SERPINF1P36955 418 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 PTH2RP49190 550 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 SELENOVP59797 346 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 AQP6Q13520 282 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 ETFDHQ16134 617 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 PGGHGQ32M88 737 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 SLC36A3Q495N2 470 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 PABPC1L2AQ5JQF8 200 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 Q5PR19 223 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 SLC35F1Q5T1Q4 408 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 ARL9Q6T311 187 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 FOXL2NBQ6ZUU3 175 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 PTCHD4Q6ZW05 846 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 HIPK1Q86Z02 1210 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 PROKR2Q8NFJ6 384 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 OR2T4Q8NH00 348 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 NABP1Q96AH0 204 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 FBXO17Q96EF6 278 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 PRRG3Q9BZD7 231 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 GRIP2Q9C0E4 1043 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 NUAK2Q9H093 628 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 RACGAP1Q9H0H5 632 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 CXXC4Q9H2H0 198 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 ARMC1Q9NVT9 282 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 ENOPH1Q9UHY7 261 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 CMAHPQ9Y471 501 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 ABCA4P78363 2273 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 TACC2O95359 2948 aa17.19■□□□□ 0.34
VEGFB-201ENST00000309422 OR4A8P0C604 315 aa17.18■□□□□ 0.34
VEGFB-201ENST00000309422 ATP6AP1Q15904 470 aa17.18■□□□□ 0.34
VEGFB-201ENST00000309422 CD300LDQ6UXZ3 194 aa17.18■□□□□ 0.34
VEGFB-201ENST00000309422 SPNS3Q6ZMD2 512 aa17.18■□□□□ 0.34
VEGFB-201ENST00000309422 ZDHHC13Q8IUH4 622 aa17.18■□□□□ 0.34
VEGFB-201ENST00000309422 OR5K1Q8NHB7 308 aa17.18■□□□□ 0.34
VEGFB-201ENST00000309422 PLEKHA8Q96JA3 519 aa17.18■□□□□ 0.34
VEGFB-201ENST00000309422 NIPSNAP1Q9BPW8 284 aa17.18■□□□□ 0.34
VEGFB-201ENST00000309422 CDADC1Q9BWV3 514 aa17.18■□□□□ 0.34
VEGFB-201ENST00000309422 CACNG6Q9BXT2 260 aa17.18■□□□□ 0.34
VEGFB-201ENST00000309422 COA3Q9Y2R0 106 aaPredicted RBP17.18■□□□□ 0.34
VEGFB-201ENST00000309422 FKBP7Q9Y680 259 aa17.18■□□□□ 0.34
VEGFB-201ENST00000309422 POLQO75417 2590 aa17.18■□□□□ 0.34
VEGFB-201ENST00000309422 B9A039 149 aa17.17■□□□□ 0.34
VEGFB-201ENST00000309422 ZNF23P17027 643 aa17.17■□□□□ 0.34
VEGFB-201ENST00000309422 STOMP27105 288 aa17.17■□□□□ 0.34
VEGFB-201ENST00000309422 CDKN1AP38936 164 aa17.17■□□□□ 0.34
VEGFB-201ENST00000309422 CDKN2AP42771 156 aaKnown RBP17.17■□□□□ 0.34
VEGFB-201ENST00000309422 RAD52P43351 418 aa17.17■□□□□ 0.34
VEGFB-201ENST00000309422 LSM6P62312 80 aaKnown RBP17.17■□□□□ 0.34
VEGFB-201ENST00000309422 SLC27A4Q6P1M0 643 aa17.17■□□□□ 0.34
VEGFB-201ENST00000309422 ZFP1Q6P2D0 407 aa17.17■□□□□ 0.34
VEGFB-201ENST00000309422 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.17■□□□□ 0.34
VEGFB-201ENST00000309422 MYPOPQ86VE0 399 aaPredicted RBP17.17■□□□□ 0.34
VEGFB-201ENST00000309422 LNX2Q8N448 690 aa17.17■□□□□ 0.34
VEGFB-201ENST00000309422 ZNF416Q9BWM5 594 aa17.17■□□□□ 0.34
VEGFB-201ENST00000309422 PLA2G12AQ9BZM1 189 aa17.17■□□□□ 0.34
VEGFB-201ENST00000309422 BCL2L14Q9BZR8 327 aa17.17■□□□□ 0.34
VEGFB-201ENST00000309422 PLK3Q9H4B4 646 aa17.17■□□□□ 0.34
VEGFB-201ENST00000309422 SRA1Q9HD15 236 aaKnown RBP17.17■□□□□ 0.34
VEGFB-201ENST00000309422 DYNLRB1Q9NP97 96 aa17.17■□□□□ 0.34
VEGFB-201ENST00000309422 EMC7Q9NPA0 242 aa17.17■□□□□ 0.34
VEGFB-201ENST00000309422 PAPOLBQ9NRJ5 636 aaKnown RBP17.17■□□□□ 0.34
VEGFB-201ENST00000309422 LRBAP50851 2863 aa17.17■□□□□ 0.34
VEGFB-201ENST00000309422 G3V2T6 193 aa17.16■□□□□ 0.34
VEGFB-201ENST00000309422 BHLHE40O14503 412 aa17.16■□□□□ 0.34
VEGFB-201ENST00000309422 DOK2O60496 412 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms