RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 STEAP3Q658P3 488 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 ZNF687Q8N1G0 1237 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 SEC11CQ9BY50 192 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 LTBP1Q14766 1721 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 OR5B21A6NL26 309 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 PCMT1P22061 227 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 FCN2Q15485 313 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 SMIM21Q3B7S5 101 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 Q6ZNX1 250 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 DIO2Q92813 273 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 HGDQ93099 445 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 ZNF442Q9H7R0 627 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 OR52A1Q9UKL2 312 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 SLC27A5Q9Y2P5 690 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 MTCH2Q9Y6C9 303 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 OR5H8P0DN80 308 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 HLA-DOBP13765 273 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 PPICP45877 212 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 KCNQ1P51787 676 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 KRTCAP2Q8N6L1 136 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 WRAP73Q9P2S5 460 aaPredicted RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 FANCMQ8IYD8 2048 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 A0A1W2PQD3 144 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 PAPLNO95428 1278 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 AADACP22760 399 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 LBX1P52954 281 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 DRAM2Q6UX65 266 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 MMP24Q9Y5R2 645 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 GCAP28676 217 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 LAP3P28838 519 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 ZNF585AQ6P3V2 769 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 SLC16A14Q7RTX9 510 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 OR52E2Q8NGJ4 325 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 ZNF480Q8WV37 535 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 NEIL2Q969S2 332 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 SAMD8Q96LT4 415 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 CHODLQ9H9P2 273 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 ZNF701Q9NV72 531 aaPredicted RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 DNAJC13O75165 2243 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 A0A1W2PPC1 479 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 HRASP01112 189 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 MT-ND6P03923 174 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 RBP2P50120 134 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 FAM3BP58499 235 aaPredicted RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 OR10K2Q6IF99 312 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 STEAP1BQ6NZ63 245 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 CLRN3Q8NCR9 226 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 ZNF160Q9HCG1 818 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 TXNL4BQ9NX01 149 aaKnown RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 VNN3Q9NY84 501 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 A0A1W2PN81 502 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 NDUFA2O43678 99 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 PSMB6P28072 239 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 ARL3P36405 182 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 CHRNA7P36544 502 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 XCR1P46094 333 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 Q6ZTK2 550 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 SIAH3Q8IW03 269 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 TIMD4Q96H15 378 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 RNASEK-C17orf49H0YIS7 233 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 GSTZ1O43708 216 aaPredicted RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 CRYABP02511 175 aaKnown RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 C8orf89P0DMQ9 161 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 APEX1P27695 318 aaKnown RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 CD68P34810 354 aaPredicted RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 ERHP84090 104 aaKnown RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 OR51T1Q8NGJ9 327 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 NUBPLQ8TB37 319 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 GIMAP1Q8WWP7 306 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 SLCO4A1Q96BD0 722 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 EBPLQ9BY08 206 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 LMAN1LQ9HAT1 526 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 PDFQ9HBH1 243 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 MRPS2Q9Y399 296 aaKnown RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 PHOX2AO14813 284 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 CBR3O75828 277 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 ENPP1P22413 925 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 FASLGP48023 281 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 DMRTA1Q5VZB9 504 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 BRI3BPQ8WY22 251 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 CCDC120Q96HB5 630 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 DEFB118Q96PH6 123 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 WDR83Q9BRX9 315 aaKnown RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 TANC1Q9C0D5 1861 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 ACSM4P0C7M7 580 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 LIMS3P0CW19 117 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 LIMS4P0CW20 117 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 CD38P28907 300 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 OPRL1P41146 370 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 SSR4P51571 173 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 MEP1AQ16819 746 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 ADAM5Q6NVV9 412 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 TMEM65Q6PI78 240 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 Q6ZVL8 140 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 PYROXD2Q8N2H3 581 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 GLYATL2Q8WU03 294 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 ARRDC3Q96B67 414 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 AKR1E2Q96JD6 320 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 RTTNQ86VV8 2226 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 KCNAB3O43448 404 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms