RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 GLYATL2Q8WU03 294 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 NXPE3Q969Y0 559 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 SPACA7Q96KW9 195 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 MRGPRX3Q96LB0 322 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 UQCC1Q9NVA1 299 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 PHYHO14832 338 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 NQO2P16083 231 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 PTAFRP25105 342 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 RBMXP38159 391 aaKnown RBP11.85□□□□□ -0.51
TRIM35-201ENST00000305364 TSFMP43897 325 aaKnown RBP11.85□□□□□ -0.51
TRIM35-201ENST00000305364 PPP1R1AQ13522 171 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 INPP5JQ15735 1006 aaPredicted RBP11.85□□□□□ -0.51
TRIM35-201ENST00000305364 EIF4E3Q8N5X7 224 aaKnown RBP11.85□□□□□ -0.51
TRIM35-201ENST00000305364 SCGB3A2Q96PL1 93 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 SLCO5A1Q9H2Y9 848 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 ACKR4Q9NPB9 350 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 MBNL1Q9NR56 388 aaKnown RBP11.85□□□□□ -0.51
TRIM35-201ENST00000305364 MIOXQ9UGB7 285 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 SCN10AQ9Y5Y9 1956 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 ZNF878C9JN71 531 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 HTR3BO95264 441 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 LYG2Q86SG7 212 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 ZNF565Q8N9K5 539 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 NUBPLQ8TB37 319 aa11.85□□□□□ -0.51
TRIM35-201ENST00000305364 SLC16A7O60669 478 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 ALOX12BO75342 701 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 ZIC2O95409 532 aaPredicted RBP11.84□□□□□ -0.51
TRIM35-201ENST00000305364 IFNA21P01568 189 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 ZNF20P17024 532 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 RPS10P46783 165 aaKnown RBP11.84□□□□□ -0.51
TRIM35-201ENST00000305364 TDGQ13569 410 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 ATPAF1Q5TC12 328 aaPredicted RBP11.84□□□□□ -0.51
TRIM35-201ENST00000305364 STX12Q86Y82 276 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 OR51A4Q8NGJ6 313 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 C5orf34Q96MH7 638 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 DCBLD2Q96PD2 775 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 IL23AQ9NPF7 189 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 FRRS1LQ9P0K9 344 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 TNFSF18Q9UNG2 199 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 LINC00587B1AMM8 73 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 DNAJB6O75190 326 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 ZNF254O75437 659 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 RDH16O75452 317 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 EIF3GO75821 320 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRIM35-201ENST00000305364 PMP2P02689 132 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 CAMLGP49069 296 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 PJVKQ0ZLH3 352 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 RUNX2Q13950 521 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 DEFB110Q30KQ9 67 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 ADAMTSL4Q6UY14 1074 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 MOB3CQ70IA8 216 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 SLC36A1Q7Z2H8 476 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 NUDCD2Q8WVJ2 157 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 ZNF681Q96N22 645 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 CDC6Q99741 560 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 ZNF251Q9BRH9 671 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 TAS2R4Q9NYW5 299 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 FLRT3Q9NZU0 649 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 HHLA2Q9UM44 414 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 MRPS17Q9Y2R5 130 aaKnown RBP11.84□□□□□ -0.51
TRIM35-201ENST00000305364 WIF1Q9Y5W5 379 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 PRRT4C9JH25 899 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 SOX1O00570 391 aaPredicted RBP11.84□□□□□ -0.51
TRIM35-201ENST00000305364 HCRTR2O43614 444 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 RAB30Q15771 203 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 ZNF679Q8IYX0 411 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 CSNK1A1LQ8N752 337 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 ZPLD1Q8TCW7 415 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 KCNJ16Q9NPI9 418 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 C4orf51C9J302 202 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 IFNA17P01571 189 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 SFTA3P0C7M3 94 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 PI3P19957 117 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 AMY2BP19961 511 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 RPS11P62280 158 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRIM35-201ENST00000305364 PMPCAQ10713 525 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 IKZF1Q13422 519 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 OR52W1Q6IF63 320 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 COX15Q7KZN9 410 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 ADGRE4PQ86SQ3 457 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 SLC43A2Q8N370 569 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 FRMD1Q8N878 549 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 OR4N2Q8NGD1 307 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 ZFYVE21Q9BQ24 234 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 ZNF700Q9H0M5 742 aa11.84□□□□□ -0.51
TRIM35-201ENST00000305364 ATXN7L1Q9ULK2 861 aaPredicted RBP11.84□□□□□ -0.51
TRIM35-201ENST00000305364 LSM5Q9Y4Y9 91 aaKnown RBP11.84□□□□□ -0.51
TRIM35-201ENST00000305364 TRPM6Q9BX84 2022 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 A0A1W2PQU0 124 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 SLC17A2O00624 439 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 BRINP1O60477 761 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 GIMD1P0DJR0 217 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 CALCRP30988 508 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 TAS2R31P59538 309 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 FZD5Q13467 585 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 HFEQ30201 348 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 AWAT2Q6E213 333 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 JMJD6Q6NYC1 403 aaPredicted RBP11.83□□□□□ -0.52
TRIM35-201ENST00000305364 ZAR1Q86SH2 424 aa11.83□□□□□ -0.52
TRIM35-201ENST00000305364 METTL27Q8N6F8 245 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms