RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 EMG1Q92979 244 aaKnown RBP7.03□□□□□ -1.28
SF3B3-201ENST00000302516 NIPSNAP1Q9BPW8 284 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 ARID2Q68CP9 1835 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 TMED7-TICAM2A0A0A6YYA0 188 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 LY86O95711 162 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 APOA2P02652 100 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 NID1P14543 1247 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 TAS2R45P59539 299 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 HTRA4P83105 476 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-201ENST00000302516 ARHGAP11BQ3KRB8 267 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 FGGYQ96C11 551 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 CXorf58Q96LI9 332 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 DNMT3BQ9UBC3 853 aaKnown RBP7.03□□□□□ -1.28
SF3B3-201ENST00000302516 TMED7Q9Y3B3 224 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 OR6C76A6NM76 312 aa7.02□□□□□ -1.28
SF3B3-201ENST00000302516 TAPBPO15533 448 aa7.02□□□□□ -1.28
SF3B3-201ENST00000302516 HOXD11P31277 338 aaPredicted RBP7.02□□□□□ -1.28
SF3B3-201ENST00000302516 NPY4RP50391 375 aa7.02□□□□□ -1.28
SF3B3-201ENST00000302516 GP2P55259 537 aaKnown RBP7.02□□□□□ -1.28
SF3B3-201ENST00000302516 BPIFB3P59826 476 aa7.02□□□□□ -1.28
SF3B3-201ENST00000302516 ENDOGQ14249 297 aaKnown RBP7.02□□□□□ -1.28
SF3B3-201ENST00000302516 PNLIPRP3Q17RR3 467 aa7.02□□□□□ -1.28
SF3B3-201ENST00000302516 COX20Q5RI15 118 aa7.02□□□□□ -1.28
SF3B3-201ENST00000302516 COL13A1Q5TAT6 717 aaPredicted RBP7.02□□□□□ -1.28
SF3B3-201ENST00000302516 TIPARPQ7Z3E1 657 aaKnown RBP7.02□□□□□ -1.28
SF3B3-201ENST00000302516 NXF5Q9H1B4 397 aaKnown RBP7.02□□□□□ -1.28
SF3B3-201ENST00000302516 RIMS4Q9H426 269 aaPredicted RBP7.02□□□□□ -1.28
SF3B3-201ENST00000302516 TRAPPC4Q9Y296 219 aa7.02□□□□□ -1.28
SF3B3-201ENST00000302516 NSG1A0A0A6YYJ2 146 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 OR52A4PA6NMU1 304 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 SOCS6O14544 535 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 LAMTOR5O43504 91 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 RRADP55042 308 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 BIDP55957 195 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 MRPS21P82921 87 aaKnown RBP7.02□□□□□ -1.29
SF3B3-201ENST00000302516 SEMA3BQ13214 749 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 LRRC18Q8N456 261 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 TMEM40Q8WWA1 233 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 TMEM18Q96B42 140 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 NMNAT3Q96T66 252 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 GAR1Q9NY12 217 aaKnown RBP7.02□□□□□ -1.29
SF3B3-201ENST00000302516 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 CXorf51AA0A1B0GTR3 108 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 TNFSF12O43508 249 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 CYTIPO60759 359 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 F13BP05160 661 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 GLAP06280 429 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 THEM4Q5T1C6 240 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 MED25Q71SY5 747 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 H1FNTQ75WM6 255 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-201ENST00000302516 DEFB119Q8N690 84 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 OR51A4Q8NGJ6 313 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 MAP3K3Q99759 626 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 DUSP21Q9H596 190 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 LYRM2Q9NU23 88 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-201ENST00000302516 MTHFD2P13995 350 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 CST5P28325 142 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-201ENST00000302516 TBC1D28Q2M2D7 210 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 NHSL1Q5SYE7 1610 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 GLIPR1L1Q6UWM5 242 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 H2BFWTQ7Z2G1 175 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 KLHDC1Q8N7A1 406 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 SEH1LQ96EE3 360 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 TNFRSF13CQ96RJ3 184 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 MARF1Q9Y4F3 1742 aaKnown RBP7.02□□□□□ -1.29
SF3B3-201ENST00000302516 TLCD2A6NGC4 264 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 HCRTR1O43613 425 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 CPN1P15169 458 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 SUMO1P63165 101 aaKnown RBP7.02□□□□□ -1.29
SF3B3-201ENST00000302516 DHODHQ02127 395 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 ACOT6Q3I5F7 207 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-201ENST00000302516 DND1Q8IYX4 353 aaKnown RBP7.02□□□□□ -1.29
SF3B3-201ENST00000302516 MUCL1Q96DR8 90 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 ERVMER34-1Q9H9K5 563 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 PPP6CO00743 305 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 MGST1P10620 155 aaKnown RBP7.02□□□□□ -1.29
SF3B3-201ENST00000302516 PTAFRP25105 342 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 GSK3AP49840 483 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 MMP15P51511 669 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 C1orf140Q5VVS0 124 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 PRICKLE2Q7Z3G6 844 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 ADIPOR2Q86V24 386 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 EGLN2Q96KS0 407 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 ATP13A2Q9NQ11 1180 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-201ENST00000302516 COL11A1P12107 1806 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-201ENST00000302516 XKRY2A2RUG3 117 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 H7BYZ3 331 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 GFRA2O00451 464 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 TEAD1P28347 426 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 CLDN17P56750 224 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 KIAA1024LP59773 190 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 EXT1Q16394 746 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 Q6ZSR9 355 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 SLC35D2Q76EJ3 337 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 NLRC3Q7RTR2 1065 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 SLC38A6Q8IZM9 456 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 CISD2Q8N5K1 135 aaKnown RBP7.02□□□□□ -1.29
SF3B3-201ENST00000302516 TTC9BQ8N6N2 239 aa7.02□□□□□ -1.29
SF3B3-201ENST00000302516 DCBLD2Q96PD2 775 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms