RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 SLC46A2Q9BY10 475 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 RNF122Q9H9V4 155 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 INSL5Q9Y5Q6 135 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 ETV7Q9Y603 341 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.2□□□□□ -0.46
SKA3-201ENST00000298260 BLOC1S5-TXNDC5H3BN57 136 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 ST8SIA5O15466 376 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 CPMP14384 443 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 NDUFB7P17568 137 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 SERPINF1P36955 418 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 CDKN2AP42771 156 aaKnown RBP12.2□□□□□ -0.46
SKA3-201ENST00000298260 DEFA6Q01524 100 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 DUSP8Q13202 625 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 KLHL26Q53HC5 615 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 PDZD11Q5EBL8 140 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 DCST2Q5T1A1 773 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 FCRL6Q6DN72 434 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 LEG1Q6P5S2 330 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 RNF113BQ8IZP6 322 aaKnown RBP12.2□□□□□ -0.46
SKA3-201ENST00000298260 SULT4A1Q9BR01 284 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 TRPM6Q9BX84 2022 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 SEC61A2Q9H9S3 476 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 CHMP1AQ9HD42 196 aaPredicted RBP12.2□□□□□ -0.46
SKA3-201ENST00000298260 TMEM100Q9NV29 134 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 ADAM29Q9UKF5 820 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 KLK13Q9UKR3 277 aa12.2□□□□□ -0.46
SKA3-201ENST00000298260 A0A1B0GV50 99 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 ZNF729A6NN14 1252 aaPredicted RBP12.19□□□□□ -0.46
SKA3-201ENST00000298260 ZNF736B4DX44 427 aaPredicted RBP12.19□□□□□ -0.46
SKA3-201ENST00000298260 M0R036 132 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 MED6O75586 246 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 ADAP1O75689 374 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 NID1P14543 1247 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 PI3P19957 117 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 AGAP20933 346 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 PGDP52209 483 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 SRSF5Q13243 272 aaKnown RBP12.19□□□□□ -0.46
SKA3-201ENST00000298260 TSC22D1Q15714 1073 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 Q3ZCU0 254 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 CDNFQ49AH0 187 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 ZNF383Q8NA42 475 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 FAM174AQ8TBP5 190 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 TSEN15Q8WW01 171 aaKnown RBP12.19□□□□□ -0.46
SKA3-201ENST00000298260 RNF126Q9BV68 326 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 POTEKPQ9BYX7 375 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 NRSN2Q9GZP1 204 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 DPEP2Q9H4A9 486 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 WDR76Q9H967 626 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 FN3KRPQ9HA64 309 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 OR5AC2Q9NZP5 309 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 SLC22A13Q9Y226 551 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 DCDC2BA2VCK2 349 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 PPIHO43447 177 aaKnown RBP12.19□□□□□ -0.46
SKA3-201ENST00000298260 PRKNO60260 465 aaPredicted RBP12.19□□□□□ -0.46
SKA3-201ENST00000298260 CLEC3AO75596 197 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 PLGP00747 810 aaPredicted RBP12.19□□□□□ -0.46
SKA3-201ENST00000298260 GNRH1P01148 92 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 OR8U9P0C7N5 309 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 CSF2RAP15509 400 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 EIF2S3P41091 472 aaKnown RBP12.19□□□□□ -0.46
SKA3-201ENST00000298260 RBM34P42696 430 aaKnown RBP12.19□□□□□ -0.46
SKA3-201ENST00000298260 FAM53BQ14153 422 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 ZNF124Q15973 351 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 ARHGAP11BQ3KRB8 267 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 AWAT1Q58HT5 328 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 DPY19L4Q7Z388 723 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 ACBD4Q8NC06 268 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 OR8U1Q8NH10 309 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 OR51F2Q8NH61 342 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 CA5BP1Q8WTZ4 195 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 RXFP3Q9NSD7 469 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 METTL1Q9UBP6 276 aaKnown RBP12.19□□□□□ -0.46
SKA3-201ENST00000298260 LPAR3Q9UBY5 353 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 HCFC2Q9Y5Z7 792 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 A0A1W2PPE2 198 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 IFITM10A6NMD0 228 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 CYB5AP00167 134 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 IGHV2-5P01817 119 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 CD2P06729 351 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 ERCC1P07992 297 aaPredicted RBP12.19□□□□□ -0.46
SKA3-201ENST00000298260 ZBTB25P24278 435 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 LSSP48449 732 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 TAS2R19P59542 299 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 PRDX1Q06830 199 aaKnown RBP12.19□□□□□ -0.46
SKA3-201ENST00000298260 MLF2Q15773 248 aaPredicted RBP12.19□□□□□ -0.46
SKA3-201ENST00000298260 RNF212Q495C1 297 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 FAM76BQ5HYJ3 339 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 LY6G5CQ5SRR4 150 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 ASPHD2Q6ICH7 369 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 SAMD14Q8IZD0 417 aaPredicted RBP12.19□□□□□ -0.46
SKA3-201ENST00000298260 PRSS35Q8N3Z0 413 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 COX18Q8N8Q8 333 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 OR10H5Q8NGA6 315 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 OR4N2Q8NGD1 307 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 MRGPRX3Q96LB0 322 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 PIGQQ9BRB3 760 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 TGIF2Q9GZN2 237 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 ALX4Q9H161 411 aaPredicted RBP12.19□□□□□ -0.46
SKA3-201ENST00000298260 HCFC1R1Q9NWW0 138 aa12.19□□□□□ -0.46
SKA3-201ENST00000298260 MRPS33Q9Y291 106 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms