RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 USB1Q9BQ65 265 aaKnown RBP12.28□□□□□ -0.44
HPS3-201ENST00000296051 C20orf24Q9BUV8 137 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 SELENOIQ9C0D9 397 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 DEFB127Q9H1M4 99 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 TCEAL2Q9H3H9 227 aaPredicted RBP12.28□□□□□ -0.44
HPS3-201ENST00000296051 FSCN3Q9NQT6 498 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 KCNIP3Q9Y2W7 256 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 D6RAR5 112 aa12.27□□□□□ -0.44
HPS3-201ENST00000296051 EPXP11678 715 aa12.27□□□□□ -0.44
HPS3-201ENST00000296051 TRHRP34981 398 aaPredicted RBP12.27□□□□□ -0.44
HPS3-201ENST00000296051 CSRP3P50461 194 aa12.27□□□□□ -0.44
HPS3-201ENST00000296051 TAS2R20P59543 309 aa12.27□□□□□ -0.44
HPS3-201ENST00000296051 DMRTC1Q5HYR2 192 aa12.27□□□□□ -0.44
HPS3-201ENST00000296051 C3orf33Q6P1S2 294 aa12.27□□□□□ -0.44
HPS3-201ENST00000296051 NHLRC1Q6VVB1 395 aa12.27□□□□□ -0.44
HPS3-201ENST00000296051 Q6ZNB5 142 aa12.27□□□□□ -0.44
HPS3-201ENST00000296051 LSRQ86X29 649 aaPredicted RBP12.27□□□□□ -0.44
HPS3-201ENST00000296051 SPTSSAQ969W0 71 aa12.27□□□□□ -0.44
HPS3-201ENST00000296051 PFDN5Q99471 154 aa12.27□□□□□ -0.44
HPS3-201ENST00000296051 SGPP1Q9BX95 441 aa12.27□□□□□ -0.44
HPS3-201ENST00000296051 BORCS7-ASMTA0A0B4J1R7 106 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 ACTL6BO94805 426 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 SNAPINO95295 136 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 GLI4P10075 376 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 GLO1Q04760 184 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 MEP1BQ16820 701 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 LSMEM1Q8N8F7 131 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 OR4D9Q8NGE8 314 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 OR5D18Q8NGL1 313 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 MS4A6EQ96DS6 147 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 MED18Q9BUE0 208 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 DVL2O14641 736 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 IFNGR1P15260 489 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 PTBP1P26599 531 aaKnown RBP eCLIP12.27□□□□□ -0.45
HPS3-201ENST00000296051 FGF9P31371 208 aaPredicted RBP12.27□□□□□ -0.45
HPS3-201ENST00000296051 RFC3P40938 356 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 HMGA2P52926 109 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 RPS27AP62979 156 aaKnown RBP12.27□□□□□ -0.45
HPS3-201ENST00000296051 UBA52P62987 128 aaKnown RBP12.27□□□□□ -0.45
HPS3-201ENST00000296051 UBE2IP63279 158 aaKnown RBP12.27□□□□□ -0.45
HPS3-201ENST00000296051 EBPQ15125 230 aaKnown RBP12.27□□□□□ -0.45
HPS3-201ENST00000296051 ZNF679Q8IYX0 411 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 RNF113BQ8IZP6 322 aaKnown RBP12.27□□□□□ -0.45
HPS3-201ENST00000296051 DTWD2Q8NBA8 298 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 OR13C9Q8NGT0 318 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 SLC2A12Q8TD20 617 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 TMED6Q8WW62 240 aa12.27□□□□□ -0.45
HPS3-201ENST00000296051 ZNF587Q96SQ5 575 aaPredicted RBP12.27□□□□□ -0.45
HPS3-201ENST00000296051 URM1Q9BTM9 101 aaKnown RBP12.27□□□□□ -0.45
HPS3-201ENST00000296051 TMEM269A0A1B0GVZ9 245 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 CAV2P51636 162 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 GUCA2AQ02747 115 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 DPTQ07507 201 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 RHEBQ15382 184 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 SLC38A1Q9H2H9 487 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 CMC2Q9NRP2 79 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 ADAM29Q9UKF5 820 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 COL6A6A6NMZ7 2263 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 ATG12O94817 140 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 HPXP02790 462 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 CRABP1P29762 137 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 CCL7P80098 99 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 BPHLQ86WA6 291 aaPredicted RBP12.26□□□□□ -0.45
HPS3-201ENST00000296051 OR5T1Q8NG75 326 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 ST7LQ8TDW4 575 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 SLAMF9Q96A28 289 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 FAM3DQ96BQ1 224 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 CCDC74BQ96LY2 380 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 ARPC5LQ9BPX5 153 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 NIT2Q9NQR4 276 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 GPATCH2Q9NW75 528 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 TESQ9UGI8 421 aaKnown RBP12.26□□□□□ -0.45
HPS3-201ENST00000296051 THSD7AQ9UPZ6 1657 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 OR2W5A6NFC9 320 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 PYCARD-AS1I3L0S3 204 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 TO15178 435 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 CD3DP04234 171 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 CEACAM5P06731 702 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 TNFSF4P23510 183 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 DAP3P51398 398 aaKnown RBP12.26□□□□□ -0.45
HPS3-201ENST00000296051 CLDN6P56747 220 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 SLC6A19Q695T7 634 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 FBXW5Q969U6 566 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 NKX6-2Q9C056 277 aaPredicted RBP12.26□□□□□ -0.45
HPS3-201ENST00000296051 POFUT1Q9H488 388 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 MEPEQ9NQ76 525 aaPredicted RBP12.26□□□□□ -0.45
HPS3-201ENST00000296051 GPR160Q9UJ42 338 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 HHLA2Q9UM44 414 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 ZNF337Q9Y3M9 751 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 DOCK3Q8IZD9 2030 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 PIAS2O75928 621 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 IGHV3-9P01782 118 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 SERPINA5P05154 406 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 GIPP09681 153 aaPredicted RBP12.26□□□□□ -0.45
HPS3-201ENST00000296051 RAB3AP20336 220 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 BDKRB2P30411 391 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 ADAM5Q6NVV9 412 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 LINC00346Q8IVM7 164 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 ELP5Q8TE02 316 aa12.26□□□□□ -0.45
HPS3-201ENST00000296051 KCNE4Q8WWG9 221 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms