RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 ZNF285Q96NJ3 590 aa15.18■□□□□ 0.02
CHRNE-201ENST00000293780 SLC46A1Q96NT5 459 aa15.18■□□□□ 0.02
CHRNE-201ENST00000293780 EXO5Q9H790 373 aa15.18■□□□□ 0.02
CHRNE-201ENST00000293780 LOC100289279A0A1B0GTE1 492 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 HMSDA8MTL9 139 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 SLC17A2O00624 439 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 CDC40O60508 579 aaKnown RBP eCLIP15.17■□□□□ 0.02
CHRNE-201ENST00000293780 TPPPO94811 219 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 GABRA1P14867 456 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 SCAND1P57086 179 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 ZP2Q05996 745 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 TUSC1Q2TAM9 212 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 STEAP1BQ6NZ63 245 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 TTLL10Q6ZVT0 673 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 DUSP19Q8WTR2 217 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 PTDSS2Q9BVG9 487 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 ZMAT3Q9HA38 289 aaKnown RBP15.17■□□□□ 0.02
CHRNE-201ENST00000293780 APMAPQ9HDC9 416 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 MMP17Q9ULZ9 603 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 BRWD1Q9NSI6 2320 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 PRSS37A4D1T9 235 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 MPZL1O95297 269 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 CTLA4P16410 223 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 IL32P24001 234 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 FAM166AQ6J272 317 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 TSSK4Q6SA08 328 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 ZNF679Q8IYX0 411 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 DEFB119Q8N690 84 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 ZNF721Q8TF20 911 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 RLN3Q8WXF3 142 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 SLC25A28Q96A46 364 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 MRPL38Q96DV4 380 aaKnown RBP15.17■□□□□ 0.02
CHRNE-201ENST00000293780 KLHDC7BQ96G42 594 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 SLC38A3Q99624 504 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 NUDT9Q9BW91 350 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 POFUT1Q9H488 388 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 TAS2R4Q9NYW5 299 aa15.17■□□□□ 0.02
CHRNE-201ENST00000293780 CGGBP1Q9UFW8 167 aaPredicted RBP15.17■□□□□ 0.02
CHRNE-201ENST00000293780 TRAV36DV7A0A075B6V5 113 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 TCRBV16S1A1N1A0A5B0 115 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 FRG2CA6NGY1 282 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 M0QYG6 137 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 PHYHO14832 338 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 B3GALNT1O75752 331 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 OR6A2O95222 327 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 DDAH2O95865 285 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 GALNSP34059 522 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 NR0B1P51843 470 aaKnown RBP15.16■□□□□ 0.02
CHRNE-201ENST00000293780 SORDQ00796 357 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 SQSTM1Q13501 440 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 CCINQ13939 588 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 RAB30Q15771 203 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 FDX2Q6P4F2 183 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 C11orf88Q6PI97 169 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 ZNF627Q7L945 461 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 RNF128Q8TEB7 428 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 GPX8Q8TED1 209 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 ZC4H2Q9NQZ6 224 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 GPR27Q9NS67 375 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 EPHA6Q9UF33 1036 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 DHDHQ9UQ10 334 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 IGKV3-11P04433 115 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 PPP3CBP16298 524 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 ZP3P21754 424 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 ADAM8P78325 824 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 BIKQ13323 160 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 TEX30Q5JUR7 227 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 TMEM225Q6GV28 225 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 GSG1LQ6UXU4 331 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 Q6ZS52 159 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 KRT77Q7Z794 578 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 GABRG1Q8N1C3 465 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 KDM8Q8N371 416 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 OR51A2Q8NGJ7 313 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 ASB5Q8WWX0 329 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 C8orf44Q96CB5 159 aa15.16■□□□□ 0.02
CHRNE-201ENST00000293780 ZNF230Q9UIE0 474 aaPredicted RBP15.16■□□□□ 0.02
CHRNE-201ENST00000293780 MRPS18BQ9Y676 258 aaKnown RBP15.16■□□□□ 0.02
CHRNE-201ENST00000293780 KIF26BQ2KJY2 2108 aa15.15■□□□□ 0.02
CHRNE-201ENST00000293780 H0YIG0 161 aa15.15■□□□□ 0.02
CHRNE-201ENST00000293780 SMAD9O15198 467 aaKnown RBP15.15■□□□□ 0.02
CHRNE-201ENST00000293780 ICAM2P13598 275 aa15.15■□□□□ 0.02
CHRNE-201ENST00000293780 RPL27P61353 136 aaKnown RBP15.15■□□□□ 0.02
CHRNE-201ENST00000293780 GLYATL3Q5SZD4 288 aa15.15■□□□□ 0.02
CHRNE-201ENST00000293780 OR10K2Q6IF99 312 aa15.15■□□□□ 0.02
CHRNE-201ENST00000293780 SLC18B1Q6NT16 456 aa15.15■□□□□ 0.02
CHRNE-201ENST00000293780 PRSS58Q8IYP2 241 aa15.15■□□□□ 0.02
CHRNE-201ENST00000293780 GALNT16Q8N428 558 aa15.15■□□□□ 0.02
CHRNE-201ENST00000293780 ZNF519Q8TB69 540 aa15.15■□□□□ 0.02
CHRNE-201ENST00000293780 SCARB1Q8WTV0 552 aa15.15■□□□□ 0.02
CHRNE-201ENST00000293780 SEH1LQ96EE3 360 aa15.15■□□□□ 0.02
CHRNE-201ENST00000293780 PELOQ9BRX2 385 aaKnown RBP15.15■□□□□ 0.02
CHRNE-201ENST00000293780 TINAGL1Q9GZM7 467 aaPredicted RBP15.15■□□□□ 0.02
CHRNE-201ENST00000293780 MS4A7Q9GZW8 240 aaPredicted RBP15.15■□□□□ 0.02
CHRNE-201ENST00000293780 DHCR7Q9UBM7 475 aaKnown RBP15.15■□□□□ 0.02
CHRNE-201ENST00000293780 IGLV1-36A0A0B4J1U3 117 aa15.15■□□□□ 0.02
CHRNE-201ENST00000293780 DCDC2BA2VCK2 349 aa15.15■□□□□ 0.02
CHRNE-201ENST00000293780 SLC25A12O75746 678 aa15.15■□□□□ 0.02
CHRNE-201ENST00000293780 CFPP27918 469 aa15.15■□□□□ 0.02
CHRNE-201ENST00000293780 IL12BP29460 328 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms