RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 KDM8Q8N371 416 aa13.55□□□□□ -0.24
CCDC116-201ENST00000292779 DNASE2BQ8WZ79 361 aa13.55□□□□□ -0.24
CCDC116-201ENST00000292779 NXPE2Q96DL1 559 aa13.55□□□□□ -0.24
CCDC116-201ENST00000292779 MESP1Q9BRJ9 268 aa13.55□□□□□ -0.24
CCDC116-201ENST00000292779 SEMA4CQ9C0C4 833 aa13.55□□□□□ -0.24
CCDC116-201ENST00000292779 B3GNT2Q9NY97 397 aa13.55□□□□□ -0.24
CCDC116-201ENST00000292779 C2orf72A6NCS6 295 aa13.54□□□□□ -0.24
CCDC116-201ENST00000292779 GGT3PA6NGU5 568 aa13.54□□□□□ -0.24
CCDC116-201ENST00000292779 CTAG2O75638 210 aa13.54□□□□□ -0.24
CCDC116-201ENST00000292779 NDUFB6O95139 128 aa13.54□□□□□ -0.24
CCDC116-201ENST00000292779 MPZL1O95297 269 aa13.54□□□□□ -0.24
CCDC116-201ENST00000292779 IGHMP01871 453 aa13.54□□□□□ -0.24
CCDC116-201ENST00000292779 HLA-DOBP13765 273 aa13.54□□□□□ -0.24
CCDC116-201ENST00000292779 OR3A3P47888 321 aa13.54□□□□□ -0.24
CCDC116-201ENST00000292779 POU3F4P49335 361 aa13.54□□□□□ -0.24
CCDC116-201ENST00000292779 ZNF81P51508 661 aa13.54□□□□□ -0.24
CCDC116-201ENST00000292779 RNF4P78317 190 aa13.54□□□□□ -0.24
CCDC116-201ENST00000292779 ROM1Q03395 351 aa13.54□□□□□ -0.24
CCDC116-201ENST00000292779 EIF2B1Q14232 305 aaKnown RBP13.54□□□□□ -0.24
CCDC116-201ENST00000292779 PRSS42Q7Z5A4 293 aa13.54□□□□□ -0.24
CCDC116-201ENST00000292779 BIVMQ86UB2 503 aa13.54□□□□□ -0.24
CCDC116-201ENST00000292779 SORCS2Q96PQ0 1159 aa13.54□□□□□ -0.24
CCDC116-201ENST00000292779 NPAS1Q99742 590 aa13.54□□□□□ -0.24
CCDC116-201ENST00000292779 NKX3-1Q99801 234 aaPredicted RBP13.54□□□□□ -0.24
CCDC116-201ENST00000292779 ABHD6Q9BV23 337 aa13.54□□□□□ -0.24
CCDC116-201ENST00000292779 CHIAQ9BZP6 476 aa13.54□□□□□ -0.24
CCDC116-201ENST00000292779 DUSP15Q9H1R2 295 aaPredicted RBP13.54□□□□□ -0.24
CCDC116-201ENST00000292779 H7C417 338 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 RBBP9O75884 186 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 SLC22A5O76082 557 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 TPPPO94811 219 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 PCGF3Q3KNV8 242 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 WDR74Q6RFH5 385 aaPredicted RBP13.53□□□□□ -0.24
CCDC116-201ENST00000292779 COX15Q7KZN9 410 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 NDUFAF7Q7L592 441 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 PLPP5Q8NEB5 264 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 STK35Q8TDR2 534 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 THRSPQ92748 146 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 SLC22A11Q9NSA0 550 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 ZNF69Q9UC07 566 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 MTFP1Q9UDX5 166 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 CDV3Q9UKY7 258 aaKnown RBP13.53□□□□□ -0.24
CCDC116-201ENST00000292779 COA3Q9Y2R0 106 aaPredicted RBP13.53□□□□□ -0.24
CCDC116-201ENST00000292779 CFAP54Q96N23 3096 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 KDM4BO94953 1096 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 CFPP27918 469 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 GUCA2AQ02747 115 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 RAB11BQ15907 218 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 C2orf76Q3KRA6 126 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 YOD1Q5VVQ6 348 aaPredicted RBP13.53□□□□□ -0.24
CCDC116-201ENST00000292779 KCTD18Q6PI47 426 aaPredicted RBP13.53□□□□□ -0.24
CCDC116-201ENST00000292779 TMPRSS9Q7Z410 1059 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 C1orf210Q8IVY1 113 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 PLPP7Q8NBV4 271 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 FAM3DQ96BQ1 224 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 UTP23Q9BRU9 249 aaKnown RBP13.53□□□□□ -0.24
CCDC116-201ENST00000292779 DPCDQ9BVM2 203 aaPredicted RBP13.53□□□□□ -0.24
CCDC116-201ENST00000292779 CA10Q9NS85 328 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 MGAT4CQ9UBM8 478 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 LRP12Q9Y561 859 aa13.53□□□□□ -0.24
CCDC116-201ENST00000292779 FTCDNL1E5RQL4 147 aa13.52□□□□□ -0.24
CCDC116-201ENST00000292779 OR2T1O43869 369 aa13.52□□□□□ -0.24
CCDC116-201ENST00000292779 ZNF354AO60765 605 aaPredicted RBP13.52□□□□□ -0.24
CCDC116-201ENST00000292779 RIDAP52758 137 aaKnown RBP13.52□□□□□ -0.24
CCDC116-201ENST00000292779 FBXW4P57775 412 aa13.52□□□□□ -0.24
CCDC116-201ENST00000292779 SLC26A5P58743 744 aa13.52□□□□□ -0.24
CCDC116-201ENST00000292779 CATSPERDQ86XM0 798 aa13.52□□□□□ -0.24
CCDC116-201ENST00000292779 OR8H3Q8N146 312 aa13.52□□□□□ -0.24
CCDC116-201ENST00000292779 THAP3Q8WTV1 239 aaPredicted RBP13.52□□□□□ -0.24
CCDC116-201ENST00000292779 IER2Q9BTL4 223 aa13.52□□□□□ -0.24
CCDC116-201ENST00000292779 ZNF768Q9H5H4 540 aaKnown RBP13.52□□□□□ -0.24
CCDC116-201ENST00000292779 CDCP1Q9H5V8 836 aa13.52□□□□□ -0.24
CCDC116-201ENST00000292779 DIABLOQ9NR28 239 aa13.52□□□□□ -0.24
CCDC116-201ENST00000292779 DHDHQ9UQ10 334 aa13.52□□□□□ -0.24
CCDC116-201ENST00000292779 TRAV18A0A075B6X5 111 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 CIB4A0PJX0 185 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 LEUTXA8MZ59 168 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 SLC17A2O00624 439 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 LAMTOR5O43504 91 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 MPC2O95563 127 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 IFNGR1P15260 489 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 CRABP1P29762 137 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 HOXA6P31267 233 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 DHPSP49366 369 aaPredicted RBP13.52□□□□□ -0.25
CCDC116-201ENST00000292779 GLO1Q04760 184 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 TMEM225Q6GV28 225 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 KMT5CQ86Y97 462 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 FAM109AQ8N4B1 249 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 FTMTQ8N4E7 242 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 MEIOBQ8N635 442 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 OR4C16Q8NGL9 310 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 STT3BQ8TCJ2 826 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 ASB5Q8WWX0 329 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 MED30Q96HR3 178 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 SLC7A5P2Q9GIP4 190 aa13.52□□□□□ -0.25
CCDC116-201ENST00000292779 ATXN7L1Q9ULK2 861 aaPredicted RBP13.52□□□□□ -0.25
CCDC116-201ENST00000292779 LOC100289279A0A1B0GTE1 492 aa13.51□□□□□ -0.25
CCDC116-201ENST00000292779 MEIS3P1A6NDR6 274 aa13.51□□□□□ -0.25
CCDC116-201ENST00000292779 MS4A18H0YCH9 400 aa13.51□□□□□ -0.25
CCDC116-201ENST00000292779 PYCARD-AS1I3L0S3 204 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms