RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 ZGLP1P0C6A0 271 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 BCKDHBP21953 392 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 ABCD3P28288 659 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 MTCP1P56278 107 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 ECH1Q13011 328 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 PHLDA2Q53GA4 152 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 EXOSC6Q5RKV6 272 aaKnown RBP4.35□□□□□ -1.71
UBR1-201ENST00000290650 METTL11BQ5VVY1 283 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 B3GNTL1Q67FW5 361 aaPredicted RBP4.35□□□□□ -1.71
UBR1-201ENST00000290650 GSG1LQ6UXU4 331 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 ANGPTL5Q86XS5 388 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 HAVCR1Q96D42 359 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 CDC6Q99741 560 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 HINT2Q9BX68 163 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 C1orf198Q9H425 327 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 DNAJB11Q9UBS4 358 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 TRBV5-3A0A0A0MS03 114 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 SC5DO75845 299 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 OR7C1O76099 320 aaPredicted RBP4.35□□□□□ -1.71
UBR1-201ENST00000290650 LALBAP00709 142 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 HOXD11P31277 338 aaPredicted RBP4.35□□□□□ -1.71
UBR1-201ENST00000290650 GLP1RP43220 463 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 CAV2P51636 162 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 CDC20Q12834 499 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 BTN1A1Q13410 526 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 Q499Y3 187 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 ZNF546Q86UE3 836 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 KLHDC8BQ8IXV7 354 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 OR10G3Q8NGC4 313 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 OR1L3Q8NH93 324 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 SLAMF9Q96A28 289 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 GIMAP5Q96F15 307 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 CCDC74BQ96LY2 380 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 PHB2Q99623 299 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 C7orf50Q9BRJ6 194 aaKnown RBP4.35□□□□□ -1.71
UBR1-201ENST00000290650 BARHL1Q9BZE3 327 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 LUZP4Q9P127 313 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 OR52A1Q9UKL2 312 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 MEMO1Q9Y316 297 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 UBE2J1Q9Y385 318 aaPredicted RBP4.35□□□□□ -1.71
UBR1-201ENST00000290650 PCDHGB2Q9Y5G2 931 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 HEATR1Q9H583 2144 aaKnown RBP4.35□□□□□ -1.71
UBR1-201ENST00000290650 KIF26AQ9ULI4 1882 aaPredicted RBP4.34□□□□□ -1.71
UBR1-201ENST00000290650 PRAMEF27A3QJZ7 478 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 OR2T1O43869 369 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 LILRB5O75023 590 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 GCM2O75603 506 aaPredicted RBP4.34□□□□□ -1.71
UBR1-201ENST00000290650 MTNR1BP49286 362 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 CCL11P51671 97 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 C17orf67Q0P5P2 114 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 PMPCAQ10713 525 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 HTR4Q13639 388 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 FBXW12Q6X9E4 464 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 TMPPEQ6ZT21 453 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 CCDC36Q8IYA8 594 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 OR4D9Q8NGE8 314 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 GOT1L1Q8NHS2 421 aaPredicted RBP4.34□□□□□ -1.71
UBR1-201ENST00000290650 NUDCD2Q8WVJ2 157 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 ROBO4Q8WZ75 1007 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 SPTSSAQ969W0 71 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 ZBTB8AQ96BR9 441 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 TSNAXQ99598 290 aaKnown RBP4.34□□□□□ -1.71
UBR1-201ENST00000290650 PHF7Q9BWX1 381 aaPredicted RBP4.34□□□□□ -1.71
UBR1-201ENST00000290650 GPR173Q9NS66 373 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 POMT2Q9UKY4 750 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 HRH3Q9Y5N1 445 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 RIF1Q5UIP0 2472 aaKnown RBP4.34□□□□□ -1.71
UBR1-201ENST00000290650 QDPRP09417 244 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 RRASP10301 218 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 BLVRBP30043 206 aaPredicted RBP4.34□□□□□ -1.71
UBR1-201ENST00000290650 RFX2P48378 723 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 MVDP53602 400 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 PCBP3P57721 371 aaKnown RBP4.34□□□□□ -1.71
UBR1-201ENST00000290650 HSF1Q00613 529 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 IFITM2Q01629 132 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 TEKQ02763 1124 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 CD226Q15762 336 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 ZNF628Q5EBL2 1059 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 ARSKQ6UWY0 536 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 Q6ZTK2 550 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 SLC22A18ASQ8N1D0 253 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 ZPLD1Q8TCW7 415 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 NT5DC2Q9H857 520 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 UNC80Q8N2C7 3258 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 A0A1W2PQF6 199 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 TMEM129A0AVI4 362 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 PATE3B3GLJ2 98 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 SEMG1P04279 462 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 PATE4P0C8F1 98 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 CDKN2AP42771 156 aaKnown RBP4.34□□□□□ -1.71
UBR1-201ENST00000290650 KIR2DL1P43626 348 aaPredicted RBP4.34□□□□□ -1.71
UBR1-201ENST00000290650 ACTBP60709 375 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 ACTG1P63261 375 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 C3P1Q6ZMU1 363 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 UBALD1Q8TB05 177 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 S100PBPQ96BU1 408 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 DEFB127Q9H1M4 99 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 SAV1Q9H4B6 383 aaPredicted RBP4.34□□□□□ -1.71
UBR1-201ENST00000290650 ESRP2Q9H6T0 727 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms