RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 ARL5BQ96KC2 179 aa17.92■□□□□ 0.46
SCUBE1-201ENST00000290460 PHF7Q9BWX1 381 aaPredicted RBP17.92■□□□□ 0.46
SCUBE1-201ENST00000290460 MTFP1Q9UDX5 166 aa17.92■□□□□ 0.46
SCUBE1-201ENST00000290460 CDV3Q9UKY7 258 aaKnown RBP17.92■□□□□ 0.46
SCUBE1-201ENST00000290460 MED12Q93074 2177 aa17.92■□□□□ 0.46
SCUBE1-201ENST00000290460 TSPAN5P62079 268 aa17.92■□□□□ 0.46
SCUBE1-201ENST00000290460 RNF4P78317 190 aa17.92■□□□□ 0.46
SCUBE1-201ENST00000290460 CSRP2Q16527 193 aa17.92■□□□□ 0.46
SCUBE1-201ENST00000290460 C15orf40Q8WUR7 153 aa17.92■□□□□ 0.46
SCUBE1-201ENST00000290460 PIPOXQ9P0Z9 390 aa17.92■□□□□ 0.46
SCUBE1-201ENST00000290460 DHDHQ9UQ10 334 aa17.92■□□□□ 0.46
SCUBE1-201ENST00000290460 TMA7Q9Y2S6 64 aaKnown RBP17.92■□□□□ 0.46
SCUBE1-201ENST00000290460 CIB4A0PJX0 185 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 MEN1O00255 615 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 CFDP00746 253 aaPredicted RBP17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 ROM1Q03395 351 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 SNTA1Q13424 505 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 EXOSC2Q13868 293 aaKnown RBP17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 POU4F3Q15319 338 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 RAB11BQ15907 218 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 TMEM225Q6GV28 225 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 COX15Q7KZN9 410 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 ASB5Q8WWX0 329 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 TAS2R4Q9NYW5 299 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 PHF3Q92576 2039 aaKnown RBP17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 CREBL2O60519 120 aaPredicted RBP17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 VSIG10L2P0DP72 767 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 IFNGR1P15260 489 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 RIDAP52758 137 aaKnown RBP17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 ZNF626Q68DY1 528 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 KCTD18Q6PI47 426 aaPredicted RBP17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 NHLRC1Q6VVB1 395 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 LINC00346Q8IVM7 164 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 OR1J4Q8NGS1 313 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 GINS4Q9BRT9 223 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 CHRDQ9H2X0 955 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 PPIEQ9UNP9 301 aaKnown RBP17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 VDAC3Q9Y277 283 aa17.91■□□□□ 0.46
SCUBE1-201ENST00000290460 TMEM272A0A1B0GTI8 110 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 FTCDNL1E5RQL4 147 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 SLC17A2O00624 439 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 GLB1P16278 677 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 ENPP1P22413 925 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 SCAND1P57086 179 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 SLC26A5P58743 744 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 GLO1Q04760 184 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 PUDPQ08623 228 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 CAMK2BQ13554 666 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 TMPRSS9Q7Z410 1059 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 CATSPERDQ86XM0 798 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 TDHQ8IZJ6 230 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 OR51A2Q8NGJ7 313 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 OR8S1Q8NH09 359 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 STT3BQ8TCJ2 826 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 DVL3Q92997 716 aaPredicted RBP17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 CLEC4MQ9H2X3 399 aaPredicted RBP17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 DIABLOQ9NR28 239 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 CGGBP1Q9UFW8 167 aaPredicted RBP17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 SUSD2Q9UGT4 822 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 EMC9Q9Y3B6 208 aa17.9■□□□□ 0.46
SCUBE1-201ENST00000290460 OR6C76A6NM76 312 aa17.89■□□□□ 0.46
SCUBE1-201ENST00000290460 SHISA8B8ZZ34 492 aa17.89■□□□□ 0.46
SCUBE1-201ENST00000290460 GIMD1P0DJR0 217 aa17.89■□□□□ 0.46
SCUBE1-201ENST00000290460 PSMA6P60900 246 aaKnown RBP17.89■□□□□ 0.46
SCUBE1-201ENST00000290460 UBE2MP61081 183 aaKnown RBP17.89■□□□□ 0.46
SCUBE1-201ENST00000290460 OR7A5Q15622 319 aa17.89■□□□□ 0.46
SCUBE1-201ENST00000290460 ESCO2Q56NI9 601 aa17.89■□□□□ 0.46
SCUBE1-201ENST00000290460 SLC38A9Q8NBW4 561 aa17.89■□□□□ 0.46
SCUBE1-201ENST00000290460 UTP23Q9BRU9 249 aaKnown RBP17.89■□□□□ 0.46
SCUBE1-201ENST00000290460 ATG5Q9H1Y0 275 aa17.89■□□□□ 0.46
SCUBE1-201ENST00000290460 MYEF2Q9P2K5 600 aaKnown RBP17.89■□□□□ 0.46
SCUBE1-201ENST00000290460 CACNA1EQ15878 2313 aa17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 IGKV1D-43A0A0B4J1Z2 117 aa17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 LOC100289279A0A1B0GTE1 492 aa17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 MS4A18H0YCH9 400 aa17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 IGHMP01871 453 aa17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 RLN1P04808 185 aa17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 GTF2F2P13984 249 aa17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 CPN1P15169 458 aa17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 SMAD4Q13485 552 aaKnown RBP17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 GRK1Q15835 563 aa17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 MS4A18Q3C1V0 323 aa17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 ARSKQ6UWY0 536 aa17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 ELMOD2Q8IZ81 293 aa17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 APCDD1LQ8NCL9 501 aa17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 OR52N5Q8NH56 324 aa17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 RBP7Q96R05 134 aa17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 SLC7A5P2Q9GIP4 190 aa17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 MED11Q9P086 117 aa17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 ATXN7L1Q9ULK2 861 aaPredicted RBP17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 HRH3Q9Y5N1 445 aa17.89■□□□□ 0.45
SCUBE1-201ENST00000290460 FRYLO94915 3013 aa17.88■□□□□ 0.45
SCUBE1-201ENST00000290460 HRGP04196 525 aa17.88■□□□□ 0.45
SCUBE1-201ENST00000290460 OC90Q02509 493 aaPredicted RBP17.88■□□□□ 0.45
SCUBE1-201ENST00000290460 RBMS2Q15434 407 aaKnown RBP17.88■□□□□ 0.45
SCUBE1-201ENST00000290460 GLYATL3Q5SZD4 288 aa17.88■□□□□ 0.45
SCUBE1-201ENST00000290460 FAM166AQ6J272 317 aa17.88■□□□□ 0.45
SCUBE1-201ENST00000290460 SPICQ8N5J4 248 aa17.88■□□□□ 0.45
SCUBE1-201ENST00000290460 OR51S1Q8NGJ8 323 aa17.88■□□□□ 0.45
SCUBE1-201ENST00000290460 STK35Q8TDR2 534 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms