RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 IMPA2O14732 288 aa21.73■■□□□ 1.07
PDF-201ENST00000288022 IGHV4-39P01824 125 aa21.73■■□□□ 1.07
PDF-201ENST00000288022 CST2P09228 141 aa21.73■■□□□ 1.07
PDF-201ENST00000288022 CCL2P13500 99 aa21.73■■□□□ 1.07
PDF-201ENST00000288022 CDKN2AP42771 156 aaKnown RBP21.73■■□□□ 1.07
PDF-201ENST00000288022 RAB35Q15286 201 aa21.73■■□□□ 1.07
PDF-201ENST00000288022 TBC1D28Q2M2D7 210 aa21.73■■□□□ 1.07
PDF-201ENST00000288022 PABPC1L2AQ5JQF8 200 aa21.73■■□□□ 1.07
PDF-201ENST00000288022 CLEC12AQ5QGZ9 265 aa21.73■■□□□ 1.07
PDF-201ENST00000288022 RPL13AP3Q6NVV1 102 aa21.73■■□□□ 1.07
PDF-201ENST00000288022 FOXL2NBQ6ZUU3 175 aa21.73■■□□□ 1.07
PDF-201ENST00000288022 LRMDAQ9H2I8 198 aa21.73■■□□□ 1.07
PDF-201ENST00000288022 YY1AP1Q9H869 796 aa21.73■■□□□ 1.07
PDF-201ENST00000288022 BARX1Q9HBU1 254 aaPredicted RBP21.73■■□□□ 1.07
PDF-201ENST00000288022 POLE4Q9NR33 117 aa21.73■■□□□ 1.07
PDF-201ENST00000288022 ITPR3Q14573 2671 aa21.73■■□□□ 1.07
PDF-201ENST00000288022 CELSR1Q9NYQ6 3014 aa21.73■■□□□ 1.07
PDF-201ENST00000288022 USF3Q68DE3 2245 aa21.72■■□□□ 1.07
PDF-201ENST00000288022 ARID1AO14497 2285 aa21.72■■□□□ 1.07
PDF-201ENST00000288022 PLCE1Q9P212 2302 aa21.72■■□□□ 1.07
PDF-201ENST00000288022 B9A039 149 aa21.72■■□□□ 1.07
PDF-201ENST00000288022 ARPC3O15145 178 aa21.72■■□□□ 1.07
PDF-201ENST00000288022 KHDRBS3O75525 346 aaKnown RBP21.72■■□□□ 1.07
PDF-201ENST00000288022 APLNRP35414 380 aa21.72■■□□□ 1.07
PDF-201ENST00000288022 PCBD1P61457 104 aa21.72■■□□□ 1.07
PDF-201ENST00000288022 SWI5Q1ZZU3 235 aa21.72■■□□□ 1.07
PDF-201ENST00000288022 MST1LQ2TV78 715 aa21.72■■□□□ 1.07
PDF-201ENST00000288022 LEG1Q6P5S2 330 aa21.72■■□□□ 1.07
PDF-201ENST00000288022 OR10G2Q8NGC3 310 aa21.72■■□□□ 1.07
PDF-201ENST00000288022 OR1J2Q8NGS2 313 aa21.72■■□□□ 1.07
PDF-201ENST00000288022 OR4K13Q8NH42 304 aa21.72■■□□□ 1.07
PDF-201ENST00000288022 ZNF416Q9BWM5 594 aa21.72■■□□□ 1.07
PDF-201ENST00000288022 EMC7Q9NPA0 242 aa21.72■■□□□ 1.07
PDF-201ENST00000288022 F8P00451 2351 aa21.72■■□□□ 1.07
PDF-201ENST00000288022 TCRBV3S1A0A5B6 114 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 C12orf71A8MTZ7 269 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 H7C417 338 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 RENP00797 406 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 HIST1H1CP16403 213 aaKnown RBP21.71■■□□□ 1.07
PDF-201ENST00000288022 APEX1P27695 318 aaKnown RBP21.71■■□□□ 1.07
PDF-201ENST00000288022 CENPAP49450 140 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 CBX1P83916 185 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 GK3PQ14409 553 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 CLEC12BQ2HXU8 276 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 DNM1P34Q6PK57 102 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 RASSF6Q6ZTQ3 369 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 AKR7LQ8NHP1 331 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 GIPC3Q8TF64 312 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 NMNAT3Q96T66 252 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 BDH2Q9BUT1 245 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 NUAK2Q9H093 628 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 PLK3Q9H4B4 646 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 TBC1D23Q9NUY8 699 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 COA3Q9Y2R0 106 aaPredicted RBP21.71■■□□□ 1.07
PDF-201ENST00000288022 CMAHPQ9Y471 501 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 TIMM10BQ9Y5J6 103 aa21.71■■□□□ 1.07
PDF-201ENST00000288022 HIVEP1P15822 2718 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 TRIM64A6NGJ6 449 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 TRIM64BA6NI03 449 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 IDH3BO43837 385 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 SSX4O60224 188 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 GPRIN2O60269 458 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 FKBP6O75344 327 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 E2F6O75461 281 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 SCG5P05408 212 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 GSTM3P21266 225 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 CCNOP22674 350 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 NUDT6P53370 316 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 RPS23P62266 143 aaKnown RBP21.7■■□□□ 1.06
PDF-201ENST00000288022 PSG4Q00888 419 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 ENDOGQ14249 297 aaKnown RBP21.7■■□□□ 1.06
PDF-201ENST00000288022 EFNB3Q15768 340 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 SLC35F1Q5T1Q4 408 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 UGT2A3Q6UWM9 527 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 GLB1L2Q8IW92 636 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 ALDH16A1Q8IZ83 802 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 SVOPLQ8N434 492 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 CPEB3Q8NE35 698 aaKnown RBP21.7■■□□□ 1.06
PDF-201ENST00000288022 OR2H1Q9GZK4 316 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 OR51B6Q9H340 312 aa21.7■■□□□ 1.06
PDF-201ENST00000288022 MMADHCQ9H3L0 296 aaPredicted RBP21.7■■□□□ 1.06
PDF-201ENST00000288022 FAM157BP0CG42 384 aa21.69■■□□□ 1.06
PDF-201ENST00000288022 STOMP27105 288 aa21.69■■□□□ 1.06
PDF-201ENST00000288022 CRABP1P29762 137 aa21.69■■□□□ 1.06
PDF-201ENST00000288022 GLRXP35754 106 aa21.69■■□□□ 1.06
PDF-201ENST00000288022 PAQR4Q8N4S7 273 aaPredicted RBP21.69■■□□□ 1.06
PDF-201ENST00000288022 OR52E2Q8NGJ4 325 aa21.69■■□□□ 1.06
PDF-201ENST00000288022 TSSK2Q96PF2 358 aa21.69■■□□□ 1.06
PDF-201ENST00000288022 VRK1Q99986 396 aaPredicted RBP21.69■■□□□ 1.06
PDF-201ENST00000288022 DGCR6LQ9BY27 220 aa21.69■■□□□ 1.06
PDF-201ENST00000288022 PLA2G12AQ9BZM1 189 aa21.69■■□□□ 1.06
PDF-201ENST00000288022 H7C1Q1 480 aa21.68■■□□□ 1.06
PDF-201ENST00000288022 SOX14O95416 240 aa21.68■■□□□ 1.06
PDF-201ENST00000288022 FOSL1P15407 271 aa21.68■■□□□ 1.06
PDF-201ENST00000288022 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.68■■□□□ 1.06
PDF-201ENST00000288022 SDR9C7Q8NEX9 313 aa21.68■■□□□ 1.06
PDF-201ENST00000288022 C18orf12Q96KH6 178 aa21.68■■□□□ 1.06
PDF-201ENST00000288022 TSSK6Q9BXA6 273 aa21.68■■□□□ 1.06
PDF-201ENST00000288022 WNT5BQ9H1J7 359 aa21.68■■□□□ 1.06
PDF-201ENST00000288022 SRA1Q9HD15 236 aaKnown RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms