RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 CD79BP40259 229 aa16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 OR3A2P47893 321 aa16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 WNT4P56705 351 aa16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 FOXF2Q12947 444 aa16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 OR2G6Q5TZ20 316 aa16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 SLC16A9Q7RTY1 509 aa16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 ERI1Q8IV48 349 aaKnown RBP16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 ZNF420Q8TAQ5 688 aaPredicted RBP16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 SMAP2Q8WU79 429 aaPredicted RBP16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 ISOC1Q96CN7 298 aa16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 ZNF837Q96EG3 531 aaPredicted RBP16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 INTS14Q96SY0 518 aa16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 DOK1Q99704 481 aa16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 GPR35Q9HC97 309 aa16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 RSL24D1Q9UHA3 163 aaKnown RBP16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 MED12LQ86YW9 2145 aa16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 A0A1W2PPL8 197 aa16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 RPL36A-HNRNPH2H7BZ11 118 aa16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 ZNF701M0R085 212 aaPredicted RBP16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 MPZL1O95297 269 aa16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 OR2T7P0C7T2 308 aa16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 GLI4P10075 376 aa16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 ZNF84P51523 738 aa16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 SIRPAP78324 504 aa16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 ARMCX4Q5H9R4 360 aa16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 SLC35F2Q8IXU6 374 aa16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 CNEP1R1Q8N9A8 125 aa16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 OR10H4Q8NGA5 316 aa16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 OR6K3Q8NGY3 331 aa16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 OR2T27Q8NH04 317 aa16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 OPALINQ96PE5 141 aa16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 TBX5Q99593 518 aa16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 SEC61A2Q9H9S3 476 aa16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 UPB1Q9UBR1 384 aa16.67■□□□□ 0.26
PDLIM3-202ENST00000284770 TNFSF13O75888 250 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 CEACAM8P31997 349 aaPredicted RBP16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 CDAP32320 146 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 GUCA1AP43080 201 aaPredicted RBP16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 HCCSP53701 268 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 ACTC1P68032 377 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 ACTA1P68133 377 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 ADAM8P78325 824 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 ROR2Q01974 943 aaKnown RBP16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 ZNF85Q03923 595 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 GALEQ14376 348 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 MEP1BQ16820 701 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 SLC16A12Q6ZSM3 486 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 FOXL2NBQ6ZUU3 175 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 ANKRD13BQ86YJ7 626 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 OR52N1Q8NH53 320 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 YIPF3Q9GZM5 350 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 CACNA1BQ00975 2339 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 A0A1W2PQL4 384 aaPredicted RBP16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 DAPL1A0PJW8 107 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 ZNF587BE7ETH6 402 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 ZNF593O00488 134 aaPredicted RBP16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 SCG5P05408 212 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 HSMCR30P0CW71 290 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 TMIGD3P0DMS9 266 aaPredicted RBP16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 ZNF823P16415 610 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 TMBIM6P55061 237 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 STK11Q15831 433 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 KCNMB1Q16558 191 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 CEACAM16Q2WEN9 425 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 CNPY1Q3B7I2 92 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 FBXW9Q5XUX1 488 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 TFAP2EQ6VUC0 442 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 DPY19L4Q7Z388 723 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 CDC20BQ86Y33 519 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 UBE2J2Q8N2K1 259 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 KLHL36Q8N4N3 616 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 NAXEQ8NCW5 288 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 OR6N2Q8NGY6 317 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 C11orf40Q8WZ69 217 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 ALG8Q9BVK2 526 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 MALT1Q9UDY8 824 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 PRSS50Q9UI38 385 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 ENPP5Q9UJA9 477 aa16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 CAB39Q9Y376 341 aaPredicted RBP16.66■□□□□ 0.26
PDLIM3-202ENST00000284770 CD36P16671 472 aa16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 RGS6P49758 472 aa16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 ENTPD1P49961 510 aa16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 MRPS34P82930 218 aaKnown RBP16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 MLLT11Q13015 90 aaPredicted RBP16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 PCK2Q16822 640 aa16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 TEX30Q5JUR7 227 aa16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 OTPQ5XKR4 325 aa16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 VWA1Q6PCB0 445 aa16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 ZNF322Q6U7Q0 402 aaPredicted RBP16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 SSX6Q7RTT6 188 aa16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 RFLNBQ8N5W9 214 aa16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 GATAD2BQ8WXI9 593 aa16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 MNTQ99583 582 aa16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 NELFAQ9H3P2 528 aa16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 POLE4Q9NR33 117 aa16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 PLSCR4Q9NRQ2 329 aa16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 SH3BGRL2Q9UJC5 107 aa16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 DOCK7Q96N67 2140 aa16.65■□□□□ 0.26
PDLIM3-202ENST00000284770 CASP6P55212 293 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms