RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 LAP3P28838 519 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 RPS23P62266 143 aaKnown RBP12.38□□□□□ -0.43
HMGN3-201ENST00000275036 PSG4Q00888 419 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 GGTLC2Q14390 218 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 CARTPTQ16568 116 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 C16orf89Q6UX73 402 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 AKR7LQ8NHP1 331 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 FNDC8Q8TC99 324 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 RASD2Q96D21 266 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 RSRC1Q96IZ7 334 aaKnown RBP12.38□□□□□ -0.43
HMGN3-201ENST00000275036 PIMREGQ9BSJ6 248 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 BPESC1Q9GZL8 116 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 C1orf198Q9H425 327 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 CDH20Q9HBT6 801 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 FBXO9Q9UK97 447 aaPredicted RBP12.38□□□□□ -0.43
HMGN3-201ENST00000275036 MXRA5Q9NR99 2828 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 COL6A5A8TX70 2615 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 LOC100509620A0A075B734 347 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 TEX13CA0A0J9YWL9 993 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 IQCMA0A1B0GVH7 501 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 A0A1W2PPL8 197 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 LYNX1G3V0Z9 82 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 NDUFS8O00217 210 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 NDUFB2O95178 105 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 STAMBPO95630 424 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 CLPTM1O96005 669 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 LYNX1P0DP58 116 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 DAOP14920 347 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 ATP6V1B2P21281 511 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 MXRA7P84157 204 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 SPIBQ01892 262 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 HSF2Q03933 536 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 PLP2Q04941 152 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 ENDOGQ14249 297 aaKnown RBP12.37□□□□□ -0.43
HMGN3-201ENST00000275036 TBC1D28Q2M2D7 210 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 RGS7BPQ6MZT1 257 aaPredicted RBP12.37□□□□□ -0.43
HMGN3-201ENST00000275036 UGT2A3Q6UWM9 527 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 ZER1Q7Z7L7 766 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 NEU4Q8WWR8 484 aaPredicted RBP12.37□□□□□ -0.43
HMGN3-201ENST00000275036 POM121L2Q96KW2 1035 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 ZNF570Q96NI8 536 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 GPX7Q96SL4 187 aaPredicted RBP12.37□□□□□ -0.43
HMGN3-201ENST00000275036 WNT5BQ9H1J7 359 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 MYOZ1Q9NP98 299 aaPredicted RBP12.37□□□□□ -0.43
HMGN3-201ENST00000275036 CCNB1IP1Q9NPC3 277 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 NRIP3Q9NQ35 241 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 POLE4Q9NR33 117 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 GRHPRQ9UBQ7 328 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 REV1Q9UBZ9 1251 aa12.37□□□□□ -0.43
HMGN3-201ENST00000275036 IGLV3-9A0A075B6K5 115 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 PRSS37A4D1T9 235 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 UNC119BA6NIH7 251 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 B2RBV5 119 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 M0R233 179 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 GADD45GO95257 159 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 FAM107AO95990 144 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 PTHP01270 115 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 FABP3P05413 133 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 CST2P09228 141 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 T-ENOLP0DO92 83 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 ZNF250P15622 560 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 CTLA4P16410 223 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 ITGA2P17301 1181 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 CCNOP22674 350 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 STOMP27105 288 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 SDHAP31040 664 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 IL2RGP31785 369 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 APLNRP35414 380 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 WNT5AP41221 380 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 UCP2P55851 309 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 KRR1Q13601 381 aaKnown RBP12.36□□□□□ -0.43
HMGN3-201ENST00000275036 ALKBH6Q3KRA9 238 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 TMEM255AQ5JRV8 349 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 OTPQ5XKR4 325 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 CYP2R1Q6VVX0 501 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 RINLQ6ZS11 566 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 PTCHD4Q6ZW05 846 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 ZNF101Q8IZC7 436 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 MSI2Q96DH6 328 aaKnown RBP12.36□□□□□ -0.43
HMGN3-201ENST00000275036 NSL1Q96IY1 281 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 ZNF416Q9BWM5 594 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 OR2H1Q9GZK4 316 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 KCNN2Q9H2S1 579 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 EMC7Q9NPA0 242 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 IL1RAPQ9NPH3 570 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 NDE1Q9NXR1 346 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 DUSP13Q9UII6 198 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 AURKCQ9UQB9 309 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 IER3IP1Q9Y5U9 82 aa12.36□□□□□ -0.43
HMGN3-201ENST00000275036 LRP5LA4QPB2 252 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 XKRYO14609 159 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 NCR1O76036 304 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 HPXP02790 462 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 LCKP06239 509 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 NAT2P11245 290 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 MSR1P21757 451 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 IGFBP5P24593 272 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 GIFP27352 417 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 RRM2P31350 389 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 DBPQ10586 325 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms